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GOLGA7 golgin A7 [ Homo sapiens (human) ]

Gene ID: 51125, updated on 1-Jun-2020

Summary

Official Symbol
GOLGA7provided by HGNC
Official Full Name
golgin A7provided by HGNC
Primary source
HGNC:HGNC:24876
See related
Ensembl:ENSG00000147533 MIM:609453
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
GCP16; GOLGA7A; HSPC041; GOLGA3AP1
Expression
Ubiquitous expression in brain (RPKM 33.3), testis (RPKM 26.7) and 25 other tissues See more
Orthologs

Genomic context

See GOLGA7 in Genome Data Viewer
Location:
8p11.21
Exon count:
6
Annotation release Status Assembly Chr Location
109.20200522 current GRCh38.p13 (GCF_000001405.39) 8 NC_000008.11 (41490396..41510980)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (41348081..41368499)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA, C/D box 65B Neighboring gene uncharacterized LOC105379391 Neighboring gene keratin 18 pseudogene 37 Neighboring gene uncharacterized LOC102723729 Neighboring gene GINS complex subunit 4

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • MGC4876, MGC21096

Gene Ontology Provided by GOA

Function Evidence Code Pubs
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
contributes_to protein-cysteine S-palmitoyltransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
Golgi to plasma membrane protein transport IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Golgi to plasma membrane protein transport IDA
Inferred from Direct Assay
more info
PubMed 
Golgi to plasma membrane transport IDA
Inferred from Direct Assay
more info
PubMed 
neutrophil degranulation TAS
Traceable Author Statement
more info
 
peptidyl-L-cysteine S-palmitoylation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
peptidyl-L-cysteine S-palmitoylation IDA
Inferred from Direct Assay
more info
PubMed 
protein stabilization IDA
Inferred from Direct Assay
more info
PubMed 
protein targeting to membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
Golgi membrane IDA
Inferred from Direct Assay
more info
PubMed 
Golgi stack IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Golgi stack IDA
Inferred from Direct Assay
more info
PubMed 
extracellular exosome HDA PubMed 
extracellular region TAS
Traceable Author Statement
more info
 
intrinsic component of Golgi membrane IDA
Inferred from Direct Assay
more info
PubMed 
palmitoyltransferase complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
palmitoyltransferase complex IDA
Inferred from Direct Assay
more info
PubMed 
tertiary granule lumen TAS
Traceable Author Statement
more info
 

General protein information

Preferred Names
golgin subfamily A member 7
Names
Golgi complex-associated protein of 16kDa
golgi autoantigen, golgin subfamily a, 7
golgi complex-associated protein of 16 kDa

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001002296.2NP_001002296.1  golgin subfamily A member 7 isoform a

    See identical proteins and their annotated locations for NP_001002296.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) represents the longest transcript and encodes the longer isoform (a). Variants 1, 2, 4 and 5 encode the same isoform (a).
    Source sequence(s)
    AC009630, AF068291, AF125102, AV650886, BC001227, BC012032, BG939345
    Consensus CDS
    CCDS34887.1
    UniProtKB/Swiss-Prot
    Q7Z5G4
    Related
    ENSP00000350378.4, ENST00000357743.9
    Conserved Domains (1) summary
    pfam10256
    Location:12124
    Erf4; Golgin subfamily A member 7/ERF4 family
  2. NM_001174124.1NP_001167595.1  golgin subfamily A member 7 isoform b

    See identical proteins and their annotated locations for NP_001167595.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) differs in the 5' UTR and uses an alternate splice site in the 3' coding region that results in a frameshift, compared to variant 2. The resulting isoform (b) has a shorter and distinct C-terminus, compared to isoform a.
    Source sequence(s)
    AC009630, AK026613, AL695304, BC001227
    Consensus CDS
    CCDS55226.1
    UniProtKB/Swiss-Prot
    Q7Z5G4
    Related
    ENSP00000386030.2, ENST00000405786.2
    Conserved Domains (1) summary
    pfam10256
    Location:12123
    Erf4; Golgin subfamily A member 7/ERF4 family
  3. NM_001362979.1NP_001349908.1  golgin subfamily A member 7 isoform a

    Status: VALIDATED

    Source sequence(s)
    AF068291, AF125102, AV650886, BC001227, BG939345, BI546026
    Consensus CDS
    CCDS34887.1
    Related
    ENSP00000429329.1, ENST00000518270.5
    Conserved Domains (1) summary
    pfam10256
    Location:12124
    Erf4; Golgin subfamily A member 7/ERF4 family
  4. NM_001362980.1NP_001349909.1  golgin subfamily A member 7 isoform a

    Status: VALIDATED

    Source sequence(s)
    AF068291, AF125102, AV650886, BC001227, BG939345, BP341683, HY131836
    Consensus CDS
    CCDS34887.1
    Conserved Domains (1) summary
    pfam10256
    Location:12124
    Erf4; Golgin subfamily A member 7/ERF4 family
  5. NM_016099.2NP_057183.2  golgin subfamily A member 7 isoform a

    See identical proteins and their annotated locations for NP_057183.2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) differs in the 5' UTR, compared to variant 2, and encodes the longer isoform (a). Variants 1, 2, 4 and 5 encode the same isoform (a).
    Source sequence(s)
    AF068291, AF125102, AL695304, AV650886, BC001227, BC012032, BG939345, BI553491
    Consensus CDS
    CCDS34887.1
    UniProtKB/Swiss-Prot
    Q7Z5G4
    Related
    ENSP00000429480.1, ENST00000520817.5
    Conserved Domains (1) summary
    pfam10256
    Location:12124
    Erf4; Golgin subfamily A member 7/ERF4 family

RNA

  1. NR_156425.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AF068291, AF125102, AV650886, BC001227, BG939345, BP341683
  2. NR_156426.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AF068291, AF125102, AL695304, AV650886, BC001227, BG939345, HY136581
  3. NR_156427.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AF068291, AF125102, AV650886, BC001227, BG939345, HY099624, HY136581

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p13 Primary Assembly

    Range
    41490396..41510980
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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