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BMI1 BMI1 proto-oncogene, polycomb ring finger [ Bos taurus (domestic cattle) ]

Gene ID: 510666, updated on 4-Oct-2024

Summary

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Gene symbol
BMI1
Gene description
BMI1 proto-oncogene, polycomb ring finger
See related
BGD:BT14753; Ensembl:ENSBTAG00000015584
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
PCGF4
Orthologs
human mouse all
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Genomic context

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See BMI1 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 13 NC_037340.1 (23430955..23440626)

Chromosome 13 - NC_037340.1Genomic Context describing neighboring genes Neighboring gene transfer RNA asparagine (anticodon GUU) Neighboring gene COMM domain containing 3 Neighboring gene sperm associated antigen 6 Neighboring gene uncharacterized LOC112449267

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037340.1 Chromosome 13 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Clone Names

  • MGC134151

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables promoter-specific chromatin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of PRC1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polycomb complex protein BMI-1
Names
BMI1 polycomb ring finger oncogene
polycomb group RING finger protein 4
polycomb group ring finger 4

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001038072.2 → NP_001033161.1  polycomb complex protein BMI-1

    See identical proteins and their annotated locations for NP_001033161.1

    Status: PROVISIONAL

    Source sequence(s)
    BC109871
    UniProtKB/Swiss-Prot
    Q32KX7
    Related
    ENSBTAP00000066261.2, ENSBTAT00000073960.2
    Conserved Domains (3) summary
    TIGR00599
    Location:8 → 132
    rad18; DNA repair protein rad18
    cd16736
    Location:12 → 65
    RING-HC_PCGF4; RING finger found in polycomb group RING finger protein 4 (PCGF4) and similar proteins
    cd17165
    Location:130 → 226
    RAWUL_PCGF4; RING finger- and WD40-associated ubiquitin-like (RAWUL) domain found in polycomb group RING finger protein 4 (PCGF4)

  2. NM_001428330.1 → NP_001415259.1  polycomb complex protein BMI-1

    Status: VALIDATED

    Source sequence(s)
    NKLS02000013
    UniProtKB/Swiss-Prot
    Q32KX7

  3. NM_001428331.1 → NP_001415260.1  polycomb complex protein BMI-1

    Status: VALIDATED

    Source sequence(s)
    NKLS02000013
    UniProtKB/Swiss-Prot
    Q32KX7

  4. NM_001428332.1 → NP_001415261.1  polycomb complex protein BMI-1

    Status: VALIDATED

    Source sequence(s)
    NKLS02000013
    UniProtKB/Swiss-Prot
    Q32KX7

  5. NM_001428333.1 → NP_001415262.1  polycomb complex protein BMI-1

    Status: VALIDATED

    Source sequence(s)
    NKLS02000013
    UniProtKB/Swiss-Prot
    Q32KX7

  6. NM_001428334.1 → NP_001415263.1  polycomb complex protein BMI-1

    Status: VALIDATED

    Source sequence(s)
    NKLS02000013
    UniProtKB/Swiss-Prot
    Q32KX7

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037340.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    23430955..23440626
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025000489.2 → XP_024856257.1  polycomb complex protein BMI-1 isoform X1

    Conserved Domains (3) summary
    TIGR00599
    Location:8 → 132
    rad18; DNA repair protein rad18
    cd16736
    Location:12 → 65
    RING-HC_PCGF4; RING finger found in polycomb group RING finger protein 4 (PCGF4) and similar proteins
    cd17165
    Location:130 → 226
    RAWUL_PCGF4; RING finger- and WD40-associated ubiquitin-like (RAWUL) domain found in polycomb group RING finger protein 4 (PCGF4)

  2. XM_025000490.2 → XP_024856258.1  polycomb complex protein BMI-1 isoform X1

    Conserved Domains (3) summary
    TIGR00599
    Location:8 → 132
    rad18; DNA repair protein rad18
    cd16736
    Location:12 → 65
    RING-HC_PCGF4; RING finger found in polycomb group RING finger protein 4 (PCGF4) and similar proteins
    cd17165
    Location:130 → 226
    RAWUL_PCGF4; RING finger- and WD40-associated ubiquitin-like (RAWUL) domain found in polycomb group RING finger protein 4 (PCGF4)

  3. XM_025000492.2 → XP_024856260.1  polycomb complex protein BMI-1 isoform X1

    Conserved Domains (3) summary
    TIGR00599
    Location:8 → 132
    rad18; DNA repair protein rad18
    cd16736
    Location:12 → 65
    RING-HC_PCGF4; RING finger found in polycomb group RING finger protein 4 (PCGF4) and similar proteins
    cd17165
    Location:130 → 226
    RAWUL_PCGF4; RING finger- and WD40-associated ubiquitin-like (RAWUL) domain found in polycomb group RING finger protein 4 (PCGF4)

  4. XM_025000491.2 → XP_024856259.1  polycomb complex protein BMI-1 isoform X1

    Conserved Domains (3) summary
    TIGR00599
    Location:8 → 132
    rad18; DNA repair protein rad18
    cd16736
    Location:12 → 65
    RING-HC_PCGF4; RING finger found in polycomb group RING finger protein 4 (PCGF4) and similar proteins
    cd17165
    Location:130 → 226
    RAWUL_PCGF4; RING finger- and WD40-associated ubiquitin-like (RAWUL) domain found in polycomb group RING finger protein 4 (PCGF4)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q32KX7.1 GenPept UniProtKB/Swiss-Prot:Q32KX7

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