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RPS27L ribosomal protein S27 like [ Homo sapiens (human) ]

Gene ID: 51065, updated on 1-Jun-2020

Summary

Official Symbol
RPS27Lprovided by HGNC
Official Full Name
ribosomal protein S27 likeprovided by HGNC
Primary source
HGNC:HGNC:18476
See related
Ensembl:ENSG00000185088 MIM:612055
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
This gene encodes a protein sharing 96% amino acid similarity with ribosomal protein S27, which suggests the encoded protein may be a component of the 40S ribosomal subunit. [provided by RefSeq, Jul 2008]
Expression
Ubiquitous expression in colon (RPKM 73.0), kidney (RPKM 50.8) and 25 other tissues See more
Orthologs

Genomic context

See RPS27L in Genome Data Viewer
Location:
15q22.2
Exon count:
4
Annotation release Status Assembly Chr Location
109.20200522 current GRCh38.p13 (GCF_000001405.39) 15 NC_000015.10 (63148249..63157477, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (63445539..63449741, complement)

Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107984798 Neighboring gene lactamase beta Neighboring gene uncharacterized LOC101928972 Neighboring gene RAB8B, member RAS oncogene family

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
RNA binding HDA PubMed 
RNA binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
cysteine-type endopeptidase activator activity involved in apoptotic process IDA
Inferred from Direct Assay
more info
PubMed 
metal ion binding IEA
Inferred from Electronic Annotation
more info
 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
structural constituent of ribosome IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
translation activator activity IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
cytosolic small ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
nucleus IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
40S ribosomal protein S27-like
Names
small ribosomal subunit protein eS27-like

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_015920.4NP_057004.1  40S ribosomal protein S27-like

    See identical proteins and their annotated locations for NP_057004.1

    Status: REVIEWED

    Source sequence(s)
    AC087612, AF070668, AW013916, BC003667
    Consensus CDS
    CCDS42048.1
    UniProtKB/Swiss-Prot
    Q71UM5
    Related
    ENSP00000331019.5, ENST00000330964.10
    Conserved Domains (1) summary
    PLN00209
    Location:682
    PLN00209; ribosomal protein S27; Provisional

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000015.10 Reference GRCh38.p13 Primary Assembly

    Range
    63148249..63157477 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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