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UTP4 UTP4, small subunit processome component [ Bos taurus (cattle) ]

Gene ID: 510315, updated on 2-Apr-2017
Gene symbol
UTP4
Gene description
UTP4, small subunit processome component
See related
BGD:BT25711; Ensembl:ENSBTAG00000006347
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
CIRH1A
Orthologs
Location:
chromosome: 18
Exon count:
18
Annotation release Status Assembly Chr Location
105 current Bos_taurus_UMD_3.1.1 (GCF_000003055.6) 18 AC_000175.1 (36469902..36500064)

Chromosome 18 - AC_000175.1Genomic Context describing neighboring genes Neighboring gene hyaluronan synthase 3 Neighboring gene chromosome transmission fidelity factor 8 Neighboring gene uncharacterized LOC100847995 Neighboring gene syntrophin beta 2

Markers

Homology

Preferred Names
U3 small nucleolar RNA-associated protein 4 homolog; cirhin
Names
cirrhosis, autosomal recessive 1A (cirhin)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001205672.1NP_001192601.1  U3 small nucleolar RNA-associated protein 4 homolog

    See identical proteins and their annotated locations for NP_001192601.1

    Status: PROVISIONAL

    Source sequence(s)
    DAAA02046699
    Related
    ENSBTAP00000008333.4, ENSBTAT00000008333.4
    Conserved Domains (3) summary
    COG2319
    Location:17324
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:2057
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:16306
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

RefSeqs of Annotated Genomes: Bos taurus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bos_taurus_UMD_3.1.1 Primary Assembly

Genomic

  1. AC_000175.1 Reference Bos_taurus_UMD_3.1.1 Primary Assembly

    Range
    36469902..36500064
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010814458.2XP_010812760.1  cirhin isoform X1

    Conserved Domains (3) summary
    COG2319
    Location:17324
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:2057
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:16306
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
  2. XM_015475728.1XP_015331214.1  cirhin isoform X2

    Conserved Domains (3) summary
    COG2319
    Location:4380
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:4285
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:2205
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

Alternate Btau_5.0.1

Genomic

  1. NC_007316.6 Alternate Btau_5.0.1

    Range
    36574257..36604390
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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