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CSGALNACT2 chondroitin sulfate N-acetylgalactosaminyltransferase 2 [ Bos taurus (domestic cattle) ]

Gene ID: 509328, updated on 26-Mar-2025
Official Symbol
CSGALNACT2provided by VGNC
Official Full Name
chondroitin sulfate N-acetylgalactosaminyltransferase 2provided by VGNC
Primary source
VGNC:VGNC:27760
See related
BGD:BT17097; EnsemblRapid:ENSBTAG00070020949
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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See CSGALNACT2 in Genome Data Viewer
Location:
chromosome: 28
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 28 NC_037355.1 (13524044..13585253)

Chromosome 28 - NC_037355.1Genomic Context describing neighboring genes Neighboring gene BMS1 ribosome biogenesis factor Neighboring gene protein lin-28 homolog A-like Neighboring gene ret proto-oncogene Neighboring gene RasGEF domain family member 1A Neighboring gene uncharacterized LOC132344126

Genomic Sequence:
NC_037355.1 Chromosome 28 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

  • Project title: Dominette sequence data
  • BioProject: PRJNA294306
  • Analysis date: Tue Dec 17 08:57:05 2024

Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi cisterna membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
chondroitin sulfate N-acetylgalactosaminyltransferase 2
NP_001192582.1
XP_005226310.1
XP_005226312.1
XP_024842392.1
XP_059738463.1
XP_059738464.1
XP_059738465.1

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001205653.1 → NP_001192582.1  chondroitin sulfate N-acetylgalactosaminyltransferase 2

    See identical proteins and their annotated locations for NP_001192582.1

    Status: PROVISIONAL

    Source sequence(s)
    NKLS02000028
    Conserved Domains (1) summary
    cl11394
    Location:140 → 516
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037355.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    13524044..13585253
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059882481.1 → XP_059738464.1  chondroitin sulfate N-acetylgalactosaminyltransferase 2 isoform X2

    UniProtKB/TrEMBL
    A0A3Q1LQC5

  2. XM_059882480.1 → XP_059738463.1  chondroitin sulfate N-acetylgalactosaminyltransferase 2 isoform X1

    UniProtKB/TrEMBL
    E1B7B3
    Related
    ENSBTAP00070028257.1, ENSBTAT00070047245.1

  3. XM_005226253.5 → XP_005226310.1  chondroitin sulfate N-acetylgalactosaminyltransferase 2 isoform X2

    See identical proteins and their annotated locations for XP_005226310.1

    UniProtKB/TrEMBL
    A0A3Q1LQC5
    Related
    ENSBTAP00070028260.1, ENSBTAT00070047250.1
    Conserved Domains (1) summary
    cl11394
    Location:173 → 549
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  4. XM_005226255.4 → XP_005226312.1  chondroitin sulfate N-acetylgalactosaminyltransferase 2 isoform X3

    UniProtKB/TrEMBL
    A0A3Q1M3V1
    Related
    ENSBTAP00070028267.1, ENSBTAT00070047262.1
    Conserved Domains (1) summary
    cl11394
    Location:173 → 515
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  5. XM_024986624.2 → XP_024842392.1  chondroitin sulfate N-acetylgalactosaminyltransferase 2 isoform X4

    Conserved Domains (1) summary
    cl11394
    Location:173 → 358
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  6. XM_059882482.1 → XP_059738465.1  chondroitin sulfate N-acetylgalactosaminyltransferase 2 isoform X4

Nucleotide Protein Strain
Heading Accession and Version

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