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NPLOC4 NPL4 homolog, ubiquitin recognition factor [ Bos taurus (cattle) ]

Gene ID: 508519, updated on 4-Jul-2020

Summary

Official Symbol
NPLOC4provided by VGNC
Official Full Name
NPL4 homolog, ubiquitin recognition factorprovided by VGNC
Primary source
VGNC:VGNC:32206
See related
Ensembl:ENSBTAG00000019105
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
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Genomic context

See NPLOC4 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
17
Annotation release Status Assembly Chr Location
106 current ARS-UCD1.2 (GCF_002263795.1) 19 NC_037346.1 (51171898..51221972)
105 previous assembly Bos_taurus_UMD_3.1.1 (GCF_000003055.6) 19 AC_000176.1 (51781191..51829659)

Chromosome 19 - NC_037346.1Genomic Context describing neighboring genes Neighboring gene oxidoreductase like domain containing 1 Neighboring gene phosphodiesterase 6G Neighboring gene tetraspanin 10 Neighboring gene FA core complex associated protein 100 Neighboring gene fascin actin-bundling protein 2, retinal

Genomic regions, transcripts, and products

General gene information

Markers

Homology

General protein information

Preferred Names
nuclear protein localization protein 4 homolog
Names
nuclear protein localization 4 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001192189.3NP_001179118.1  nuclear protein localization protein 4 homolog

    See identical proteins and their annotated locations for NP_001179118.1

    Status: PROVISIONAL

    Source sequence(s)
    NKLS02000019
    UniProtKB/TrEMBL
    F1N7U2
    Related
    ENSBTAP00000040249.3, ENSBTAT00000042613.4
    Conserved Domains (4) summary
    sd00029
    Location:584603
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam05020
    Location:105245
    zf-NPL4; NPL4 family, putative zinc binding region
    pfam05021
    Location:249556
    NPL4; NPL4 family
    pfam11543
    Location:679
    UN_NPL4; Nuclear pore localization protein NPL4

RefSeqs of Annotated Genomes: Bos taurus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD1.2 Primary Assembly

Genomic

  1. NC_037346.1 Reference ARS-UCD1.2 Primary Assembly

    Range
    51171898..51221972
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024979864.1XP_024835632.1  nuclear protein localization protein 4 homolog isoform X1

    Conserved Domains (3) summary
    sd00029
    Location:496515
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam05020
    Location:17157
    zf-NPL4; NPL4 family, putative zinc binding region
    pfam05021
    Location:161468
    NPL4; NPL4 family
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