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FTSJ3 FtsJ RNA 2'-O-methyltransferase 3 [ Bos taurus (domestic cattle) ]

Gene ID: 508497, updated on 5-Sep-2025
Official Symbol
FTSJ3provided by VGNC
Official Full Name
FtsJ RNA 2'-O-methyltransferase 3provided by VGNC
Primary source
VGNC:VGNC:29139
See related
BGD:BT23978; EnsemblRapid:ENSBTAG00070021464
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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See FTSJ3 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
21
Annotation release Status Assembly Chr Location
RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 19 NC_037346.1 (48069135..48077607, complement)

Chromosome 19 - NC_037346.1Genomic Context describing neighboring genes Neighboring gene STE20 related adaptor alpha Neighboring gene coiled-coil domain containing 47 Neighboring gene DEAD-box helicase 42 Neighboring gene proteasome 26S subunit, ATPase 5 Neighboring gene SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2

Genomic Sequence:
NC_037346.1 Chromosome 19 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

  • Project title: Dominette sequence data
  • BioProject: PRJNA294306
  • Analysis date: Tue Dec 17 08:57:05 2024

Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Markers

Homology

Clone Names

  • MGC140597

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables rRNA (guanine) methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables rRNA (uridine-2'-O-)-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in rRNA methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of preribosome, large subunit precursor IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
pre-rRNA 2'-O-ribose RNA methyltransferase FTSJ3
Names
FtsJ RNA methyltransferase homolog 3
FtsJ homolog 3
putative rRNA methyltransferase 3
NP_001068830.1

Length

  • 834
XP_024835631.1

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001075362.1 → NP_001068830.1  pre-rRNA 2'-O-ribose RNA methyltransferase FTSJ3

    See identical proteins and their annotated locations for NP_001068830.1

    Status: PROVISIONAL

    Source sequence(s)
    BC118406
    UniProtKB/TrEMBL
    Q17QE8
    Related
    ENSBTAP00070028934.1, ENSBTAT00070048434.1
    Conserved Domains (3) summary
    COG0293
    Location:4 → 203
    RlmE; 23S rRNA U2552 (ribose-2'-O)-methylase RlmE/FtsJ [Translation, ribosomal structure and biogenesis]
    pfam07780
    Location:631 → 821
    Spb1_C; Spb1 C-terminal domain
    pfam11861
    Location:232 → 397
    DUF3381; Domain of unknown function (DUF3381)

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037346.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    48069135..48077607 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024979863.2 → XP_024835631.1  pre-rRNA 2'-O-ribose RNA methyltransferase FTSJ3 isoform X1

    UniProtKB/TrEMBL
    F1MY97
    Conserved Domains (3) summary
    COG0293
    Location:4 → 203
    RlmE; 23S rRNA U2552 (ribose-2'-O)-methylase RlmE/FtsJ [Translation, ribosomal structure and biogenesis]
    pfam07780
    Location:635 → 823
    Spb1_C; Spb1 C-terminal domain
    pfam11861
    Location:232 → 398
    DUF3381; Domain of unknown function (DUF3381)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials