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RFC5 replication factor C subunit 5 [ Bos taurus (domestic cattle) ]

Gene ID: 508389, updated on 5-Sep-2025
Official Symbol
RFC5provided by VGNC
Official Full Name
replication factor C subunit 5provided by VGNC
Primary source
VGNC:VGNC:33889
See related
BGD:BT20683; EnsemblRapid:ENSBTAG00070027529
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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See RFC5 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 17 NC_037344.1 (57183195..57194572, complement)

Chromosome 17 - NC_037344.1Genomic Context describing neighboring genes Neighboring gene transfer RNA lysine (anticodon UUU) Neighboring gene V-set and immunoglobulin domain containing 10 Neighboring gene WD repeat and SOCS box containing 2 Neighboring gene kinase suppressor of ras 2 Neighboring gene U6 spliceosomal RNA Neighboring gene nitric oxide synthase 1 Neighboring gene uncharacterized LOC132342620

Genomic Sequence:
NC_037344.1 Chromosome 17 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

  • Project title: Dominette sequence data
  • BioProject: PRJNA294306
  • Analysis date: Tue Dec 17 08:57:05 2024

Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA clamp loader activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in DNA-templated DNA replication IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of DNA replication factor C complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
replication factor C subunit 5
Names
replication factor C (activator 1) 5, 36.5kDa
replication factor C 5

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001075358.1 → NP_001068826.1  replication factor C subunit 5

    See identical proteins and their annotated locations for NP_001068826.1

    Status: PROVISIONAL

    Source sequence(s)
    BC108105
    UniProtKB/TrEMBL
    A0A3Q1LY33, Q32PI3
    Related
    ENSBTAP00070037508.1, ENSBTAT00070062660.1
    Conserved Domains (4) summary
    cd00009
    Location:34 → 175
    AAA; The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes ABC, ...
    TIGR00678
    Location:43 → 215
    holB; DNA polymerase III, delta' subunit
    pfam08542
    Location:257 → 289
    Rep_fac_C; Replication factor C C-terminal domain
    pfam16193
    Location:191 → 219
    AAA_assoc_2; AAA C-terminal domain

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037344.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    57183195..57194572 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059875929.1 → XP_059731912.1  replication factor C subunit 5 isoform X1

    UniProtKB/TrEMBL
    A0A3Q1LY33, A0A3Q1N9R6
    Related
    ENSBTAP00070037520.1, ENSBTAT00070062676.1

  2. XM_059875930.1 → XP_059731913.1  replication factor C subunit 5 isoform X2

    UniProtKB/TrEMBL
    A0A3Q1LY33
Nucleotide Protein Strain
Heading Accession and Version

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Molecular Biology Databases
Research Materials