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GATAD2A GATA zinc finger domain containing 2A [ Bos taurus (domestic cattle) ]

Gene ID: 508384, updated on 30-Jan-2025
Official Symbol
GATAD2Aprovided by VGNC
Official Full Name
GATA zinc finger domain containing 2Aprovided by VGNC
Primary source
VGNC:VGNC:29271
See related
EnsemblRapid:ENSBTAG00070005718
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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See GATAD2A in Genome Data Viewer
Location:
chromosome: 7
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 7 NC_037334.1 (3814802..3913266, complement)

Chromosome 7 - NC_037334.1Genomic Context describing neighboring genes Neighboring gene NADH:ubiquinone oxidoreductase subunit A13 Neighboring gene testis specific serine kinase 6 Neighboring gene MAU2 sister chromatid cohesion factor Neighboring gene U6 spliceosomal RNA Neighboring gene SURP and G-patch domain containing 1

Genomic Sequence:
NC_037334.1 Chromosome 7 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

  • Project title: Dominette sequence data
  • BioProject: PRJNA294306
  • Analysis date: Tue Dec 17 08:57:05 2024

Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Markers

Homology

Clone Names

  • MGC165927

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of NuRD complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
transcriptional repressor p66-alpha
Names
p66 alpha

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001103090.3 → NP_001096560.1  transcriptional repressor p66-alpha

    See identical proteins and their annotated locations for NP_001096560.1

    Status: VALIDATED

    Source sequence(s)
    NKLS02000007
    UniProtKB/TrEMBL
    A7YY50, F1MCH5
    Conserved Domains (3) summary
    pfam00320
    Location:416 → 450
    GATA; GATA zinc finger
    pfam11221
    Location:96 → 165
    Med21; Subunit 21 of Mediator complex
    pfam16563
    Location:135 → 171
    P66_CC; Coiled-coil and interaction region of P66A and P66B with MBD2

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037334.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    3814802..3913266 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010806523.4 → XP_010804825.1  transcriptional repressor p66-alpha isoform X3

    UniProtKB/TrEMBL
    A0A3Q1M2D2
    Related
    ENSBTAP00070007481.1, ENSBTAT00070013077.1
    Conserved Domains (3) summary
    pfam00320
    Location:423 → 457
    GATA; GATA zinc finger
    pfam11221
    Location:103 → 172
    Med21; Subunit 21 of Mediator complex
    pfam16563
    Location:142 → 178
    P66_CC; Coiled-coil and interaction region of P66A and P66B with MBD2

  2. XM_024994028.2 → XP_024849796.1  transcriptional repressor p66-alpha isoform X2

    UniProtKB/TrEMBL
    A7YY50, F1MCH5
    Conserved Domains (3) summary
    pfam00320
    Location:416 → 450
    GATA; GATA zinc finger
    pfam11221
    Location:96 → 165
    Med21; Subunit 21 of Mediator complex
    pfam16563
    Location:135 → 171
    P66_CC; Coiled-coil and interaction region of P66A and P66B with MBD2

  3. XM_005208434.5 → XP_005208491.1  transcriptional repressor p66-alpha isoform X1

    See identical proteins and their annotated locations for XP_005208491.1

    UniProtKB/TrEMBL
    A0A3S5ZPD8
    Related
    ENSBTAP00070007476.1, ENSBTAT00070013068.1
    Conserved Domains (3) summary
    pfam00320
    Location:423 → 457
    GATA; GATA zinc finger
    pfam11221
    Location:103 → 172
    Med21; Subunit 21 of Mediator complex
    pfam16563
    Location:142 → 178
    P66_CC; Coiled-coil and interaction region of P66A and P66B with MBD2

  4. XM_005208436.5 → XP_005208493.1  transcriptional repressor p66-alpha isoform X1

    See identical proteins and their annotated locations for XP_005208493.1

    UniProtKB/TrEMBL
    A0A3S5ZPD8
    Conserved Domains (3) summary
    pfam00320
    Location:423 → 457
    GATA; GATA zinc finger
    pfam11221
    Location:103 → 172
    Med21; Subunit 21 of Mediator complex
    pfam16563
    Location:142 → 178
    P66_CC; Coiled-coil and interaction region of P66A and P66B with MBD2

  5. XM_005208433.5 → XP_005208490.1  transcriptional repressor p66-alpha isoform X1

    See identical proteins and their annotated locations for XP_005208490.1

    UniProtKB/TrEMBL
    A0A3S5ZPD8
    Conserved Domains (3) summary
    pfam00320
    Location:423 → 457
    GATA; GATA zinc finger
    pfam11221
    Location:103 → 172
    Med21; Subunit 21 of Mediator complex
    pfam16563
    Location:142 → 178
    P66_CC; Coiled-coil and interaction region of P66A and P66B with MBD2

  6. XM_059888035.1 → XP_059744018.1  transcriptional repressor p66-alpha isoform X1

    UniProtKB/TrEMBL
    A0A3S5ZPD8
Nucleotide Protein Strain
Heading Accession and Version

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