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yciZ [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 5061509, updated on 24-Aug-2024

Summary

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Official Symbol
yciZ
Primary source
ASAP:ABE-0285180
Locus tag
b4596
See related
ECOCYC:G0-10591
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
deoL; ECK4406
Summary
May have homologs in Salmonella and Enterobacter. [More information is available at EcoGene: EG14460].
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Genomic context

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Sequence:
NC_000913.3 (1344436..1344609, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene osmotically-inducible lipoprotein OsmB Neighboring gene DNA-binding transcriptional dual regulator YciT Neighboring gene protein YmiD Neighboring gene cyclic di-GMP phosphodiesterase PdeR Neighboring gene putative protein YmiB

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. DeoT, a DeoR-type transcriptional regulator of multiple target genes. Elgrably-Weiss M, et al. FEMS Microbiol Lett, 2006 Jan. PMID 16451192
  2. Small membrane proteins found by comparative genomics and ribosome binding site models. Hemm MR, et al. Mol Microbiol, 2008 Dec. PMID 19121005, Free PMC Article
  3. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
  4. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
  5. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
UPF0509 family protein YciZ

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1344436..1344609 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_001165317.1 UPF0509 family protein YciZ [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for YP_001165317.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A376M8A7, A0A377D1B0, A0A826P144
    Conserved Domains (1) summary
    PRK13658
    Location:1 → 57
    PRK13658; hypothetical protein; Provisional
Nucleotide Protein
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