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PRKCD protein kinase C delta [ Bos taurus (cattle) ]

Gene ID: 505708, updated on 2-Jul-2020

Summary

Official Symbol
PRKCDprovided by VGNC
Official Full Name
protein kinase C deltaprovided by VGNC
Primary source
VGNC:VGNC:33329
See related
BGD:BT11517; Ensembl:ENSBTAG00000008719
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs

Genomic context

See PRKCD in Genome Data Viewer
Location:
chromosome: 22
Exon count:
21
Annotation release Status Assembly Chr Location
106 current ARS-UCD1.2 (GCF_002263795.1) 22 NC_037349.1 (47746199..47780548, complement)
105 previous assembly Bos_taurus_UMD_3.1.1 (GCF_000003055.6) 22 AC_000179.1 (48307242..48337780, complement)

Chromosome 22 - NC_037349.1Genomic Context describing neighboring genes Neighboring gene transketolase Neighboring gene uncharacterized LOC104975561 Neighboring gene PRELI domain containing protein 3B pseudogene Neighboring gene transfer RNA glycine (anticodon UCC) Neighboring gene RFT1 homolog

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

General gene information

Markers

Homology

General protein information

Preferred Names
protein kinase C delta type
NP_001071323.1
XP_024838244.1
XP_024838245.1
XP_024838246.1
XP_024838247.1
XP_024838248.1
XP_024838249.1

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001077855.2NP_001071323.1  protein kinase C delta type

    See identical proteins and their annotated locations for NP_001071323.1

    Status: PROVISIONAL

    Source sequence(s)
    BC126577
    UniProtKB/TrEMBL
    A0JN97
    Related
    ENSBTAP00000011487.5, ENSBTAT00000011487.6
    Conserved Domains (3) summary
    smart00220
    Location:349603
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    pfam00130
    Location:231283
    C1_1; Phorbol esters/diacylglycerol binding domain (C1 domain)
    cl21453
    Location:353668
    PKc_like; Protein Kinases, catalytic domain

RefSeqs of Annotated Genomes: Bos taurus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD1.2 Primary Assembly

Genomic

  1. NC_037349.1 Reference ARS-UCD1.2 Primary Assembly

    Range
    47746199..47780548 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024982478.1XP_024838246.1  protein kinase C delta type isoform X1

    Conserved Domains (2) summary
    pfam00130
    Location:231283
    C1_1; Phorbol esters/diacylglycerol binding domain (C1 domain)
    cl21453
    Location:364679
    PKc_like; Protein Kinases, catalytic domain
  2. XM_024982479.1XP_024838247.1  protein kinase C delta type isoform X2

    Conserved Domains (2) summary
    pfam00130
    Location:231283
    C1_1; Phorbol esters/diacylglycerol binding domain (C1 domain)
    cl21453
    Location:362677
    PKc_like; Protein Kinases, catalytic domain
  3. XM_024982476.1XP_024838244.1  protein kinase C delta type isoform X1

    Conserved Domains (2) summary
    pfam00130
    Location:231283
    C1_1; Phorbol esters/diacylglycerol binding domain (C1 domain)
    cl21453
    Location:364679
    PKc_like; Protein Kinases, catalytic domain
  4. XM_024982481.1XP_024838249.1  protein kinase C delta type isoform X4

    Conserved Domains (2) summary
    pfam00130
    Location:231283
    C1_1; Phorbol esters/diacylglycerol binding domain (C1 domain)
    cl21453
    Location:351666
    PKc_like; Protein Kinases, catalytic domain
  5. XM_024982480.1XP_024838248.1  protein kinase C delta type isoform X3

    Conserved Domains (2) summary
    pfam00130
    Location:231283
    C1_1; Phorbol esters/diacylglycerol binding domain (C1 domain)
    cl21453
    Location:353668
    PKc_like; Protein Kinases, catalytic domain
  6. XM_024982477.1XP_024838245.1  protein kinase C delta type isoform X1

    Conserved Domains (2) summary
    pfam00130
    Location:231283
    C1_1; Phorbol esters/diacylglycerol binding domain (C1 domain)
    cl21453
    Location:364679
    PKc_like; Protein Kinases, catalytic domain
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