U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

IFT46 intraflagellar transport 46 [ Bos taurus (domestic cattle) ]

Gene ID: 505579, updated on 5-Sep-2025
Official Symbol
IFT46provided by VGNC
Official Full Name
intraflagellar transport 46provided by VGNC
Primary source
VGNC:VGNC:30069
See related
BGD:BT20896; EnsemblRapid:ENSBTAG00070032403
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
C11orf60; C15H11orf60
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table
See IFT46 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 15 NC_037342.1 (29205366..29219617, complement)

Chromosome 15 - NC_037342.1Genomic Context describing neighboring genes Neighboring gene tetratricopeptide repeat domain 36 Neighboring gene transmembrane protein 25 Neighboring gene microRNA mir-2285ak Neighboring gene archain 1 Neighboring gene pleckstrin homology like domain family B member 1 Neighboring gene microRNA mir-12011

Genomic Sequence:
NC_037342.1 Chromosome 15 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

  • Project title: Dominette sequence data
  • BioProject: PRJNA294306
  • Analysis date: Tue Dec 17 08:57:05 2024

Related articles in PubMed

  1. Knockdown of the intraflagellar transport protein IFT46 stimulates selective gene expression in mouse chondrocytes and affects early development in zebrafish. Gouttenoire J, et al. J Biol Chem, 2007 Oct 19. PMID 17720815
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Characterization of a similar gene in mouse and zebrafish.
    Title: Knockdown of the intraflagellar transport protein IFT46 stimulates selective gene expression in mouse chondrocytes and affects early development in zebrafish.
Submit: New GeneRIF Correction

Markers

Homology

Clone Names

  • MGC139434

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intraciliary transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in centrosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of intraciliary transport particle B IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in motile cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
intraflagellar transport protein 46 homolog
Names
intraflagellar transport 46 homolog
intraflagellar transport protein IFT46

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001075209.1 → NP_001068677.1  intraflagellar transport protein 46 homolog

    See identical proteins and their annotated locations for NP_001068677.1

    Status: PROVISIONAL

    Source sequence(s)
    BC116107
    UniProtKB/Swiss-Prot
    Q1LZB4
    Related
    ENSBTAP00070044743.1, ENSBTAT00070073425.1
    Conserved Domains (1) summary
    pfam12317
    Location:62 → 264
    IFT46_B_C; Intraflagellar transport complex B protein 46 C terminal

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037342.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    29205366..29219617 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005215916.5 → XP_005215973.1  intraflagellar transport protein 46 homolog isoform X1

    UniProtKB/TrEMBL
    A0AAA9SM61
    Related
    ENSBTAP00070044760.1, ENSBTAT00070073448.1
    Conserved Domains (1) summary
    pfam12317
    Location:62 → 264
    IFT46_B_C; Intraflagellar transport complex B protein 46 C terminal

RNA

  1. XR_009490572.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q1LZB4.1 GenPept UniProtKB/Swiss-Prot:Q1LZB4

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.