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MALT1 MALT1 paracaspase [ Bos taurus (domestic cattle) ]

Gene ID: 504994, updated on 30-Jan-2025
Official Symbol
MALT1provided by VGNC
Official Full Name
MALT1 paracaspaseprovided by VGNC
Primary source
VGNC:VGNC:31156
See related
BGD:BT12762; EnsemblRapid:ENSBTAG00070023512
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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See MALT1 in Genome Data Viewer
Location:
chromosome: 24
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 24 NC_037351.1 (57775041..57841386)

Chromosome 24 - NC_037351.1Genomic Context describing neighboring genes Neighboring gene alpha kinase 2 Neighboring gene uncharacterized LOC101907607 Neighboring gene BET1 homolog Neighboring gene mitochondrial import receptor subunit TOM5 homolog Neighboring gene uncharacterized LOC112444193 Neighboring gene zinc finger protein 532 Neighboring gene O-acyltransferase like Neighboring gene transfer RNA glutamic acid (anticodon UUC)

Genomic Sequence:
NC_037351.1 Chromosome 24 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

  • Project title: Dominette sequence data
  • BioProject: PRJNA294306
  • Analysis date: Tue Dec 17 08:57:05 2024

Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in B cell activation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in T cell receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in innate immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of NF-kappaB transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of canonical NF-kappaB signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
mucosa-associated lymphoid tissue lymphoma translocation protein 1
Names
mucosa associated lymphoid tissue lymphoma translocation gene 1

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RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037351.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    57775041..57841386
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002697836.7 → XP_002697882.2  mucosa-associated lymphoid tissue lymphoma translocation protein 1 isoform X1

    UniProtKB/TrEMBL
    A0AAA9SFL9, F1MBS7
    Related
    ENSBTAP00070031936.1, ENSBTAT00070053123.1
    Conserved Domains (4) summary
    smart00410
    Location:155 → 223
    IG_like; Immunoglobulin like
    cd08783
    Location:52 → 148
    Death_MALT1; Death domain similar to that found in Mucosa-associated lymphoid tissue-lymphoma-translocation gene 1
    pfam00656
    Location:368 → 585
    Peptidase_C14; Caspase domain
    pfam13895
    Location:263 → 333
    Ig_2; Immunoglobulin domain

  2. XM_005224359.5 → XP_005224416.1  mucosa-associated lymphoid tissue lymphoma translocation protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A3Q1M417, A0AAA9SFL9
    Related
    ENSBTAP00070031949.1, ENSBTAT00070053145.1
    Conserved Domains (4) summary
    smart00410
    Location:155 → 223
    IG_like; Immunoglobulin like
    cd08783
    Location:52 → 148
    Death_MALT1; Death domain similar to that found in Mucosa-associated lymphoid tissue-lymphoma-translocation gene 1
    pfam00656
    Location:357 → 574
    Peptidase_C14; Caspase domain
    pfam13895
    Location:263 → 333
    Ig_2; Immunoglobulin domain
Nucleotide Protein Strain
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