CHAF1A chromatin assembly factor 1 subunit A [Bos taurus (domestic cattle)] - Gene

Summary

Official Symbol: CHAF1Aprovided by VGNC
Official Full Name: chromatin assembly factor 1 subunit Aprovided by VGNC
Primary source: VGNC:VGNC:27266
See related: BGD:BT17126; EnsemblRapid:ENSBTAG00070014852
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Bos taurus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 7

Exon count:: 17

Annotation release	Status	Assembly	Chr	Location
RS_2024_12	current	ARS-UCD2.0 (GCF_002263795.3)	7	NC_037334.1 (19676586..19701627, complement)

Chromosome 7 - NC_037334.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:: NC_037334.1 Chromosome 7 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Dominette sequence data
BioProject: PRJNA294306
Analysis date: Tue Dec 17 08:57:05 2024

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RefSeq

Process	Evidence Code	Pubs
involved_in nucleosome assembly	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
part_of CAF-1 complex	IEA Inferred from Electronic Annotation more info	PubMed
located_in nucleus	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: chromatin assembly factor 1 subunit A

Names: CAF-1 subunit A; CAF-I 150 kDa subunit; CAF-I p150; CAF-Ip150; chromatin assembly factor 1, subunit A (p150); chromatin assembly factor I p150 subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001101842.2 → NP_001095312.1 chromatin assembly factor 1 subunit A

See identical proteins and their annotated locations for NP_001095312.1

Status: PROVISIONAL

Source sequence(s)

BC147896

UniProtKB/Swiss-Prot

A6QLA6

UniProtKB/TrEMBL

A0A3Q1LY69

Related

ENSBTAP00070019829.1, ENSBTAT00070033583.1

Conserved Domains (4) summary

pfam11600
Location:322 → 481

CAF-1_p150; Chromatin assembly factor 1 complex p150 subunit, N-terminal

pfam12253
Location:560 → 603

CAF1A; Chromatin assembly factor 1 subunit A

pfam15539
Location:667 → 961

CAF1-p150_C2; CAF1 complex subunit p150, region binding to CAF1-p60 at C-term

pfam15557
Location:1 → 229

CAF1-p150_N; CAF1 complex subunit p150, region binding to PCNA