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Taar9 trace amine-associated receptor 9 [ Mus musculus (house mouse) ]

Gene ID: 503558, updated on 8-Feb-2024

Summary

Official Symbol
Taar9provided by MGI
Official Full Name
trace amine-associated receptor 9provided by MGI
Primary source
MGI:MGI:3527454
See related
Ensembl:ENSMUSG00000037424 AllianceGenome:MGI:3527454
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm231; taR-9
Summary
Predicted to enable trace-amine receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Is expressed in olfactory epithelium. Orthologous to human TAAR9 (trace amine associated receptor 9). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

See Taar9 in Genome Data Viewer
Location:
10 A4; 10 11.44 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (23984386..23985432, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (24108488..24109534, complement)

Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene trace amine-associated receptor 8B Neighboring gene trace amine-associated receptor 8C Neighboring gene STARR-seq mESC enhancer starr_26061 Neighboring gene STARR-positive B cell enhancer mm9_chr10:23851315-23851616 Neighboring gene STARR-seq mESC enhancer starr_26062 Neighboring gene predicted gene, 40614 Neighboring gene STARR-positive B cell enhancer ABC_E6825 Neighboring gene syntaxin 7

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables G protein-coupled amine receptor activity RCA
inferred from Reviewed Computational Analysis
more info
PubMed 
enables G protein-coupled receptor activity IEA
Inferred from Electronic Annotation
more info
 
enables trace-amine receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables trace-amine receptor activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within G protein-coupled receptor signaling pathway RCA
inferred from Reviewed Computational Analysis
more info
PubMed 
acts_upstream_of_or_within signal transduction IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in membrane RCA
inferred from Reviewed Computational Analysis
more info
PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
trace amine-associated receptor 9
Names
mTaar9

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001010831.1NP_001010831.1  trace amine-associated receptor 9

    See identical proteins and their annotated locations for NP_001010831.1

    Status: PROVISIONAL

    Source sequence(s)
    AY702340
    Consensus CDS
    CCDS23748.1
    UniProtKB/Swiss-Prot
    B2RT07, Q5QD04
    Related
    ENSMUSP00000043552.6, ENSMUST00000041180.7
    Conserved Domains (2) summary
    pfam00001
    Location:49311
    7tm_1; 7 transmembrane receptor (rhodopsin family)
    cl21561
    Location:43168
    7tm_4; Olfactory receptor

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000076.7 Reference GRCm39 C57BL/6J

    Range
    23984386..23985432 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)