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Ttc23l tetratricopeptide repeat domain 23-like [ Rattus norvegicus (Norway rat) ]

Gene ID: 502510, updated on 3-Jun-2026
Symbol
Ttc23lprovided by RGD
Full Name
tetratricopeptide repeat domain 23-likeprovided by RGD
Primary source
RGD:1564928
See related
Ensembl:ENSRNOG00000055986 AllianceGenome:RGD:1564928
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1564928
Summary
Orthologous to human TTC23L (tetratricopeptide repeat domain 23 like). [provided by Alliance of Genome Resources, Jul 2025]
Expression
Restricted expression toward (RPKM 119.9) See more
Orthologs
all
Try the new Gene page
Try the new Transcripts and proteins table
See Ttc23l in Genome Data Viewer
Location:
2q16
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 2 NC_086020.1 (61203825..61265453, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 2 NC_051337.1 (59476666..59538313, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 2 NC_005101.4 (60492314..60538551, complement)

Chromosome 2 - NC_086020.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA48 Neighboring gene mitochondrial ribosomal protein L40, pseudogene 1 Neighboring gene RAD1 checkpoint DNA exonuclease Neighboring gene dpy-30 histone methyltransferase complex regulatory subunit, pseudogene 1 Neighboring gene retinoic acid induced 14 Neighboring gene uncharacterized LOC120100740 Neighboring gene uncharacterized LOC103691483

Go to nucleotide: Graphics FASTA GenBank

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RGD

Component Evidence Code Pubs
located_in midbody ISO
Inferred from Sequence Orthology
more info
  
Preferred Names
tetratricopeptide repeat protein 23-like

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001433220.1 → NP_001420149.1  tetratricopeptide repeat protein 23-like isoform 1

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000002
    UniProtKB/TrEMBL
    A0A0G2JYJ8

  2. NM_001433221.1 → NP_001420150.1  tetratricopeptide repeat protein 23-like isoform 2

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000002
    UniProtKB/TrEMBL
    A6KJS7

  3. NM_001433222.1 → NP_001420151.1  tetratricopeptide repeat protein 23-like isoform 3

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000002

  4. NM_001433223.1 → NP_001420152.1  tetratricopeptide repeat protein 23-like isoform 4

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000002

RNA

  1. NR_197336.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000002

  2. NR_197337.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000002

  3. NR_197338.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000002

  4. NR_197339.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000002

  5. NR_197340.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000002

  6. NR_197341.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000002

  7. NR_197342.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000002

  8. NR_197343.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000002

  9. NR_197344.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000002

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086020.1 Reference GRCr8

    Range
    61203825..61265453 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039103552.2 → XP_038959480.1  

    Related
    ENSRNOP00000070682.2, ENSRNOT00000086809.3
    Conserved Domains (3) summary
    PRK11788
    Location:251 → 316
    PRK11788; tetratricopeptide repeat protein; Provisional
    sd00006
    Location:211 → 243
    TPR; TPR repeat [structural motif]
    pfam13424
    Location:213 → 278
    TPR_12; Tetratricopeptide repeat

  2. XM_039103559.2 → XP_038959487.1  

    Conserved Domains (3) summary
    PRK11788
    Location:64 → 129
    PRK11788; tetratricopeptide repeat protein; Provisional
    sd00006
    Location:24 → 56
    TPR; TPR repeat [structural motif]
    pfam13424
    Location:26 → 91
    TPR_12; Tetratricopeptide repeat

  3. XM_039103561.1 → XP_038959489.1  tetratricopeptide repeat protein 23-like isoform X5

    Conserved Domains (3) summary
    PRK11788
    Location:277 → 342
    PRK11788; tetratricopeptide repeat protein; Provisional
    sd00006
    Location:237 → 269
    TPR; TPR repeat [structural motif]
    pfam13424
    Location:239 → 304
    TPR_12; Tetratricopeptide repeat

  4. XM_063282847.1 → XP_063138917.1  

  5. XM_039103558.1 → XP_038959486.1  

    Conserved Domains (3) summary
    PRK11788
    Location:64 → 129
    PRK11788; tetratricopeptide repeat protein; Provisional
    sd00006
    Location:24 → 56
    TPR; TPR repeat [structural motif]
    pfam13424
    Location:26 → 91
    TPR_12; Tetratricopeptide repeat

  6. XM_039103557.2 → XP_038959485.1  

    Conserved Domains (2) summary
    sd00006
    Location:211 → 243
    TPR; TPR repeat [structural motif]
    pfam13424
    Location:213 → 278
    TPR_12; Tetratricopeptide repeat

  7. XM_039103556.2 → XP_038959484.1  tetratricopeptide repeat protein 23-like isoform X3

    Conserved Domains (2) summary
    sd00006
    Location:211 → 243
    TPR; TPR repeat [structural motif]
    pfam13424
    Location:213 → 278
    TPR_12; Tetratricopeptide repeat

  8. XM_039103555.2 → XP_038959483.1  

    Conserved Domains (2) summary
    sd00006
    Location:211 → 243
    TPR; TPR repeat [structural motif]
    pfam13424
    Location:213 → 278
    TPR_12; Tetratricopeptide repeat

  9. XM_039103554.2 → XP_038959482.1  

    Conserved Domains (2) summary
    sd00006
    Location:211 → 243
    TPR; TPR repeat [structural motif]
    pfam13424
    Location:213 → 278
    TPR_12; Tetratricopeptide repeat

  10. XM_063282848.1 → XP_063138918.1  

RNA

  1. XR_005500732.2 RNA Sequence

  2. XR_005500733.2 RNA Sequence

  3. XR_010064129.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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