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GSPATT00008240001 uncharacterized protein [ Paramecium tetraurelia ]

Gene ID: 5024873, updated on 23-Nov-2023

Summary

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Gene symbol
GSPATT00008240001
Gene description
uncharacterized protein
Locus tag
GSPATT00008240001
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Paramecium tetraurelia (strain: Stock d4-2)
Lineage
Eukaryota; Sar; Alveolata; Ciliophora; Intramacronucleata; Oligohymenophorea; Peniculida; Parameciidae; Paramecium
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Genomic context

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Location:
chromosome: undetermined
Exon count:
7

NW_001799067.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_001799067.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Global trends of whole-genome duplications revealed by the ciliate Paramecium tetraurelia. Aury JM, et al. Nature, 2006 Nov 9. PMID 17086204

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in calcium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_001799067.1 Reference assembly

    Range
    540935..550088 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001439051.1 → XP_001439088.1  uncharacterized protein GSPATT00008240001 [Paramecium tetraurelia]

    See identical proteins and their annotated locations for XP_001439088.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0CLM4, G7ZU99
    Conserved Domains (4) summary
    pfam00520
    Location:2693 → 2869
    Ion_trans; Ion transport protein
    pfam02815
    Location:271 → 440
    MIR; MIR domain
    pfam08454
    Location:2182 → 2276
    RIH_assoc; RyR and IP3R Homology associated
    cl19745
    Location:15 → 260
    Ins145_P3_rec; Inositol 1,4,5-trisphosphate/ryanodine receptor
Nucleotide Protein
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