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AT4G32272 Nucleotide/sugar transporter family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 5008177, updated on 7-Sep-2023

Summary

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Gene symbol
AT4G32272
Gene description
Nucleotide/sugar transporter family protein
Primary source
Araport:AT4G32272
Locus tag
AT4G32272
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 4
Exon count:
11
Sequence:
Chromosome: 4; NC_003075.7 (15576763..15579896, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Ubiquitin-like superfamily protein Neighboring gene tRNA-Arg Neighboring gene ncRNA Neighboring gene indole-3-acetic acid inducible 29

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A Golgi UDP-GlcNAc transporter delivers substrates for N-linked glycans and sphingolipids. Ebert B, et al. Nat Plants, 2018 Oct. PMID 30224661
  2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_001085010.2
NM_001203958.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables nucleotide-sugar transmembrane transporter activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within N-glycan fucosylation IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within N-glycan processing IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in UDP-N-acetylglucosamine transmembrane transport IDA
Inferred from Direct Assay
more info
 PubMed 
acts_upstream_of_or_within sphingolipid biosynthetic process IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
colocalizes_with Golgi apparatus IDA
Inferred from Direct Assay
more info
 PubMed 
located_in Golgi membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasma membrane ISM
Inferred from Sequence Model
more info
  
colocalizes_with trans-Golgi network IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
Nucleotide/sugar transporter family protein
NP_001078479.1
  • Nucleotide/sugar transporter family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: UDP-N-acetylglucosamine (UAA) transporter family (TAIR:AT4G31600.1); Has 2058 Blast hits to 2056 proteins in 233 species: Archae - 0; Bacteria - 5; Metazoa - 459; Fungi - 367; Plants - 1044; Viruses - 0; Other Eukaryotes - 183 (source: NCBI BLink).
NP_001190887.1
  • Nucleotide/sugar transporter family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: UDP-N-acetylglucosamine (UAA) transporter family (TAIR:AT4G31600.1).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    15576763..15579896 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001085010.2 → NP_001078479.1  Nucleotide/sugar transporter family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001078479.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    A8MRY9, O49364
    UniProtKB/TrEMBL
    A0A178V0A9, A0A5S9XXX6, A0A7G2F2L9
    Conserved Domains (1) summary
    COG5070
    Location:37 → 340
    VRG4; Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

  2. NM_001203958.1 → NP_001190887.1  Nucleotide/sugar transporter family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001190887.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A7G2F2L9, F4JU87
    Conserved Domains (1) summary
    COG5070
    Location:64 → 355
    VRG4; Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A8MRY9.1

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