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OSTLU_6525 hypothetical protein [ Ostreococcus lucimarinus CCE9901 ]

Gene ID: 5006346, updated on 21-Dec-2023

Summary

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Gene symbol
OSTLU_6525
Gene description
hypothetical protein
Locus tag
OSTLU_6525
Gene type
protein coding
RNA name
predicted protein
RefSeq status
PROVISIONAL
Organism
Ostreococcus lucimarinus CCE9901 (strain: CCE9901)
Lineage
Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococcus
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Genomic context

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See OSTLU_6525 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
1
Sequence:
Chromosome: 18; NC_009372.1 (145730..146506, complement)

Chromosome 18 - NC_009372.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009372.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The tiny eukaryote Ostreococcus provides genomic insights into the paradox of plankton speciation. Palenik B, et al. Proc Natl Acad Sci U S A, 2007 May 1. PMID 17460045, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009372.1 Reference assembly

    Range
    145730..146506 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001422319.1 → XP_001422356.1  predicted protein, partial [Ostreococcus lucimarinus CCE9901]

    See identical proteins and their annotated locations for XP_001422356.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A4SAB5
    Conserved Domains (1) summary
    cl11394
    Location:4 → 257
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
Heading Accession and Version

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