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Mapk1ip1 mitogen-activated protein kinase 1 interacting protein 1 [ Rattus norvegicus (Norway rat) ]

Gene ID: 499280, updated on 13-Apr-2024

Summary

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Official Symbol
Mapk1ip1provided by RGD
Official Full Name
mitogen-activated protein kinase 1 interacting protein 1provided by RGD
Primary source
RGD:1565431
See related
Ensembl:ENSRNOG00000016935 AllianceGenome:RGD:1565431
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1565431
Summary
Predicted to enable identical protein binding activity. Orthologous to human MAPK1IP1L (mitogen-activated protein kinase 1 interacting protein 1 like). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in Thymus (RPKM 96.8), Adrenal (RPKM 82.0) and 9 other tissues See more
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Genomic context

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Location:
1q41
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (203084938..203095455, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (193655319..193665817, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (211195440..211205772, complement)

Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120099951 Neighboring gene transcription elongation regulator 1-like Neighboring gene uncharacterized LOC134485191 Neighboring gene protein phosphatase 2, regulatory subunit B, delta Neighboring gene BCL2 interacting protein 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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Related articles in PubMed

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables identical protein binding IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
MAPK-interacting and spindle-stabilizing protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001419503.1 → NP_001406432.1  MAPK-interacting and spindle-stabilizing protein

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000001
    UniProtKB/TrEMBL
    A0A8I6AA66, B0JYS4

  2. NM_001419504.1 → NP_001406433.1  MAPK-interacting and spindle-stabilizing protein

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000001
    UniProtKB/TrEMBL
    A0A8I6AA66, B0JYS4

  3. NM_001419505.1 → NP_001406434.1  MAPK-interacting and spindle-stabilizing protein

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000001
    UniProtKB/TrEMBL
    A0A8I6AA66, B0JYS4
    Related
    ENSRNOP00000022711.1, ENSRNOT00000022714.4

  4. NM_001419506.1 → NP_001406435.1  MAPK-interacting and spindle-stabilizing protein

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000001
    UniProtKB/TrEMBL
    A0A8I6AA66, B0JYS4
    Related
    ENSRNOP00000097187.1, ENSRNOT00000117354.1

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086019.1 Reference GRCr8

    Range
    203084938..203095455 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039087859.2 → XP_038943787.1  MAPK-interacting and spindle-stabilizing protein isoform X1

    UniProtKB/TrEMBL
    A0A8I6AA66, B0JYS4
    Conserved Domains (1) summary
    pfam15822
    Location:1 → 166
    MISS; MAPK-interacting and spindle-stabilizing protein-like

  2. XM_063271516.1 → XP_063127586.1  MAPK-interacting and spindle-stabilizing protein isoform X1

    UniProtKB/TrEMBL
    A0A8I6AA66, B0JYS4

  3. XM_039087852.2 → XP_038943780.1  MAPK-interacting and spindle-stabilizing protein isoform X1

    UniProtKB/TrEMBL
    A0A8I6AA66, B0JYS4
    Related
    ENSRNOP00000088648.1
    Conserved Domains (1) summary
    pfam15822
    Location:1 → 166
    MISS; MAPK-interacting and spindle-stabilizing protein-like

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001122782.1: Suppressed sequence

    Description
    NM_001122782.1: This RefSeq was removed because currently there is insufficient support for the transcript.
Nucleotide Protein Strain
Heading Accession and Version

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