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Uqcrq ubiquinol-cytochrome c reductase, complex III subunit VII [ Rattus norvegicus (Norway rat) ]

Gene ID: 497902, updated on 18-Apr-2019

Summary

Official Symbol
Uqcrqprovided by RGD
Official Full Name
ubiquinol-cytochrome c reductase, complex III subunit VIIprovided by RGD
Primary source
RGD:1562350
See related
Ensembl:ENSRNOG00000048174
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Qpc
Expression
Biased expression in Heart (RPKM 941.9), Muscle (RPKM 507.7) and 9 other tissues See more
Orthologs

Genomic context

See Uqcrq in Genome Data Viewer
Location:
10q22
Exon count:
3
Annotation release Status Assembly Chr Location
106 current Rnor_6.0 (GCF_000001895.5) 10 NC_005109.4 (38779132..38782489, complement)
104 previous assembly Rnor_5.0 (GCF_000001895.4) 10 NC_005109.3 (38561411..38564771, complement)

Chromosome 10 - NC_005109.4Genomic Context describing neighboring genes Neighboring gene AF4/FMR2 family, member 4 Neighboring gene 60S ribosomal protein L10-like Neighboring gene liver-expressed antimicrobial peptide 2 Neighboring gene growth differentiation factor 9 Neighboring gene shroom family member 1

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Pathways from BioSystems

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
molecular_function ND
No biological Data available
more info
 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
contributes_to ubiquinol-cytochrome-c reductase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
biological_process ND
No biological Data available
more info
 
cerebellar Purkinje cell layer development IEA
Inferred from Electronic Annotation
more info
 
cerebellar Purkinje cell layer development ISO
Inferred from Sequence Orthology
more info
PubMed 
hippocampus development IEA
Inferred from Electronic Annotation
more info
 
hippocampus development ISO
Inferred from Sequence Orthology
more info
PubMed 
hypothalamus development IEA
Inferred from Electronic Annotation
more info
 
hypothalamus development ISO
Inferred from Sequence Orthology
more info
PubMed 
midbrain development IEA
Inferred from Electronic Annotation
more info
 
midbrain development ISO
Inferred from Sequence Orthology
more info
PubMed 
mitochondrial electron transport, ubiquinol to cytochrome c IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
pons development IEA
Inferred from Electronic Annotation
more info
 
pons development ISO
Inferred from Sequence Orthology
more info
PubMed 
pyramidal neuron development IEA
Inferred from Electronic Annotation
more info
 
pyramidal neuron development ISO
Inferred from Sequence Orthology
more info
PubMed 
subthalamus development IEA
Inferred from Electronic Annotation
more info
 
subthalamus development ISO
Inferred from Sequence Orthology
more info
PubMed 
thalamus development IEA
Inferred from Electronic Annotation
more info
 
thalamus development ISO
Inferred from Sequence Orthology
more info
PubMed 
Component Evidence Code Pubs
cellular_component ND
No biological Data available
more info
 
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
mitochondrial respiratory chain complex III IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
mitochondrion ISO
Inferred from Sequence Orthology
more info
PubMed 

General protein information

Preferred Names
cytochrome b-c1 complex subunit 8
Names
complex III subunit 8
complex III subunit VIII
low molecular mass ubiquinone-binding protein
ubiquinol-cytochrome c reductase complex 9.5 kDa protein
ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C
NP_001020305.1
XP_006246378.1

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001025134.1NP_001020305.1  cytochrome b-c1 complex subunit 8

    See identical proteins and their annotated locations for NP_001020305.1

    Status: PROVISIONAL

    Source sequence(s)
    AY323237
    UniProtKB/Swiss-Prot
    Q7TQ16
    Related
    ENSRNOP00000065074.1, ENSRNOT00000073964.2
    Conserved Domains (1) summary
    pfam02939
    Location:479
    UcrQ; UcrQ family

RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Rnor_6.0 Primary Assembly

Genomic

  1. NC_005109.4 Reference Rnor_6.0 Primary Assembly

    Range
    38779132..38782489 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006246316.3XP_006246378.1  cytochrome b-c1 complex subunit 8 isoform X1

    See identical proteins and their annotated locations for XP_006246378.1

    UniProtKB/Swiss-Prot
    Q7TQ16
    Conserved Domains (1) summary
    pfam02939
    Location:479
    UcrQ; UcrQ family

Alternate Rn_Celera

Genomic

  1. AC_000078.1 Alternate Rn_Celera

    Range
    36933353..36936640 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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