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vepp1 ventral pancreatic precursor 1 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 496615, updated on 20-Nov-2023

Summary

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Official Symbol
vepp1provided by Xenbase
Official Full Name
ventral pancreatic precursor 1provided by Xenbase
Primary source
Xenbase:XB-GENE-483027
See related
Ensembl:ENSXETG00000024990
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
vpp1; ewi-3; igsf2; igsf3
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Genomic context

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Location:
chromosome: 2
Exon count:
4
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 2 NC_030678.2 (3128259..3134075)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) Unplaced Scaffold NW_016683421.1 (153674..159639, complement)

Chromosome 2 - NC_030678.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100491517 Neighboring gene F-box protein 40 Neighboring gene SID1 transmembrane family member 1 Neighboring gene upstream transcription factor family member 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
immunoglobulin superfamily member 3
Names
immunoglobulin superfamily, member 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030678.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    3128259..3134075
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002941849.4 → XP_002941895.2  immunoglobulin superfamily member 3

    UniProtKB/TrEMBL
    Q5PPP8
    Related
    ENSXETP00000060827.3, ENSXETT00000061092.3
    Conserved Domains (2) summary
    smart00410
    Location:32 → 144
    IG_like; Immunoglobulin like
    cl11960
    Location:155 → 250
    Ig; Immunoglobulin domain
Nucleotide Protein Strain
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Gene LinkOut

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