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rorc.L RAR related orphan receptor C L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 495242, updated on 8-Apr-2017

Summary

Official Symbol
rorc.L
Official Full Name
RAR related orphan receptor C L homeolog
Primary source
Xenbase:XB-GENE-865439
Locus tag
XELAEV_18040830mg
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
rorc

Genomic context

See rorc.L in Genome Data Viewer
Location:
chromosome: 8L
Exon count:
9
Annotation release Status Assembly Chr Location
100 current Xenopus_laevis_v2 (GCF_001663975.1) 8L NC_030738.1 (117649789..117675223, complement)

Chromosome 8L - NC_030738.1Genomic Context describing neighboring genes Neighboring gene cAMP responsive element binding protein 3-like 4 L homeolog Neighboring gene leucine rich repeat and Ig domain containing 4 L homeolog Neighboring gene serine/threonine-protein kinase N1-like Neighboring gene uncharacterized LOC108699639

Genomic regions, transcripts, and products

Genomic Sequence:
NC_030738.1 Chromosome 8L Reference Xenopus_laevis_v2 Primary Assembly

General protein information

Preferred Names
RAR related orphan receptor C L homeolog

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001094920.1NP_001088389.1  RAR related orphan receptor C L homeolog

    See identical proteins and their annotated locations for NP_001088389.1

    Status: PROVISIONAL

    Source sequence(s)
    BC084664
    UniProtKB/TrEMBL
    Q5XG07
    Conserved Domains (2) summary
    cd06939
    Location:155393
    NR_LBD_ROR_like; The ligand binding domain of Retinoid-related orphan receptors, of the nuclear receptor superfamily
    cl02596
    Location:123
    NR_DBD_like; DNA-binding domain of nuclear receptors is composed of two C4-type zinc fingers

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v2 Primary Assembly

Genomic

  1. NC_030738.1 Reference Xenopus_laevis_v2 Primary Assembly

    Range
    117649789..117675223 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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