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snx18.S sorting nexin 18 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 495108, updated on 5-Sep-2025
Official Symbol
snx18.S
Official Full Name
sorting nexin 18 S homeolog
Primary source
Xenbase:XB-GENE-958829
Locus tag
XELAEV_18010962mg
See related
AllianceGenome:Xenbase:XB-GENE-958829
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
snag1; snx18; sh3px2; snx18-a; snx18-b; sh3pxd3b
Summary
Predicted to enable phosphatidylinositol binding activity. Predicted to act upstream of or within mitotic cell cycle and protein transport. Predicted to be located in cytoplasmic vesicle membrane. Orthologous to human SNX18 (sorting nexin 18). [provided by Alliance of Genome Resources, Apr 2025]
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See snx18.S in Genome Data Viewer
Location:
chromosome: 1S
Exon count:
2
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 1S NC_054372.1 (180638576..180661255, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 1S NC_030725.1 (160795626..160818250, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) Unplaced Scaffold NW_016727411.1 (1..481)

Chromosome 1S - NC_054372.1Genomic Context describing neighboring genes Neighboring gene granzyme A S homeolog Neighboring gene endothelial cell-specific molecule 1 S homeolog Neighboring gene heat shock protein beta-3-like Neighboring gene ARF like GTPase 15 S homeolog

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. A deep proteomics perspective on CRM1-mediated nuclear export and nucleocytoplasmic partitioning. Kırlı K, et al. Elife, 2015 Dec 17. PMID 26673895, Free PMC Article
  2. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

Products Interactant Other Gene Complex Source Pubs Description

Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables phosphatidylinositol binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within cell division IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within endocytosis IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within mitotic cell cycle IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within protein transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasmic vesicle IEA
Inferred from Electronic Annotation
more info
  
located_in cytoplasmic vesicle membrane IEA
Inferred from Electronic Annotation
more info
  
located_in cytosol IEA
Inferred from Electronic Annotation
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
Preferred Names
sorting nexin 18 S homeolog

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001094806.1 → NP_001088275.1  sorting nexin 18 S homeolog

    See identical proteins and their annotated locations for NP_001088275.1

    Status: PROVISIONAL

    Source sequence(s)
    BC084281
    UniProtKB/TrEMBL
    A0A974E3G3, Q5XGZ5
    Conserved Domains (3) summary
    cd11897
    Location:4 → 58
    SH3_SNX18; Src Homology 3 domain of Sorting nexin 18
    cl02563
    Location:241 → 365
    PX_domain; The Phox Homology domain, a phosphoinositide binding module
    cl12013
    Location:378 → 584
    BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054372.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    180638576..180661255 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials