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MSH2 mutS homolog 2 [ Canis lupus familiaris (dog) ]

Gene ID: 494002, updated on 21-Oct-2017

Summary

Official Symbol
MSH2provided by VGNC
Official Full Name
mutS homolog 2provided by VGNC
Primary source
VGNC:VGNC:43438
See related
Ensembl:ENSCAFG00000002659
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs

Genomic context

See MSH2 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
16
Annotation release Status Assembly Chr Location
105 current CanFam3.1 (GCF_000002285.3) 10 NC_006592.3 (49517448..49594001)

Chromosome 10 - NC_006592.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102155086 Neighboring gene uncharacterized LOC106559416 Neighboring gene epithelial cell adhesion molecule Neighboring gene 60S ribosomal protein L32 pseudogene Neighboring gene potassium two pore domain channel subfamily K member 12 Neighboring gene uncharacterized LOC106559417 Neighboring gene 60S ribosomal protein L39

Genomic regions, transcripts, and products

Genomic Sequence:
NC_006592.3 Chromosome 10 Reference CanFam3.1 Primary Assembly

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Pathways from BioSystems

General gene information

Markers

Homology

General protein information

Preferred Names
DNA mismatch repair protein Msh2
Names
mutS homolog 2, colon cancer, nonpolyposis type 1
mutS-like protein 2

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CanFam3.1 Primary Assembly

Genomic

  1. NC_006592.3 Reference CanFam3.1 Primary Assembly

    Range
    49517448..49594001
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_538482.5XP_538482.2  DNA mismatch repair protein Msh2

    UniProtKB/TrEMBL
    F1PM37
    Related
    ENSCAFP00000003876.3, ENSCAFT00000004191.3
    Conserved Domains (6) summary
    cd03285
    Location:633852
    ABC_MSH2_euk; ATP-binding cassette domain of eukaryotic MutS2 homolog
    COG0249
    Location:23853
    MutS; DNA mismatch repair ATPase MutS [Replication, recombination and repair]
    pfam01624
    Location:18132
    MutS_I; MutS domain I
    pfam05188
    Location:158284
    MutS_II; MutS domain II
    pfam05190
    Location:473569
    MutS_IV; MutS family domain IV
    pfam05192
    Location:305423
    MutS_III; MutS domain III
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