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HCG11 HLA complex group 11 [ Homo sapiens (human) ]

Gene ID: 493812, updated on 9-Oct-2022

Summary

Official Symbol
HCG11provided by HGNC
Official Full Name
HLA complex group 11provided by HGNC
Primary source
HGNC:HGNC:17707
See related
Ensembl:ENSG00000228223 AllianceGenome:HGNC:17707
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
bK14H9.3; CTA-14H9.3
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Genomic context

See HCG11 in Genome Data Viewer
Location:
6p22.2
Exon count:
1
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (26521706..26527393)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (26390105..26395792)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (26521934..26527621)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107986583 Neighboring gene RNA, U6 small nuclear 502, pseudogene Neighboring gene tRNA-Leu (anticodon CAG) 1-7 Neighboring gene CRISPRi-validated cis-regulatory element chr6.1172 Neighboring gene tRNA-Thr (anticodon AGT) 2-1 Neighboring gene tRNA-Arg (anticodon ACG) 1-2

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Other Names

  • HLA complex group 11 (non-protein coding)

Clone Names

  • FLJ14049, FLJ30357

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_026790.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL121936
    Related
    ENST00000411553.3

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    26521706..26527393
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 PATCHES

Genomic

  1. NW_025791780.1 Reference GRCh38.p14 PATCHES

    Range
    67886..73573
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    26390105..26395792
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)