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nradd neurotrophin receptor associated death domain [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 493361, updated on 4-Nov-2024

Summary

Official Symbol
nraddprovided by Xenbase
Official Full Name
neurotrophin receptor associated death domainprovided by Xenbase
Primary source
Xenbase:XB-GENE-947583
See related
Ensembl:ENSXETG00000023872 AllianceGenome:Xenbase:XB-GENE-947583
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
nrh; ngfr; nrdd; nrh1; CD271; p75ntr; plaidd; fullback; p75(NTR); tnfrsf16; Gp80-LNGFR
Summary
Acts upstream of or within gastrulation with mouth forming second. Predicted to be located in plasma membrane. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See nradd in Genome Data Viewer
Location:
chromosome: 6
Exon count:
6
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 6 NC_030682.2 (12415994..12434178, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 6 NC_030682.1 (4217714..4237973)

Chromosome 6 - NC_030682.2Genomic Context describing neighboring genes Neighboring gene zeta tubulin Neighboring gene SET domain containing 2 Neighboring gene anaphase promoting complex subunit 15 Neighboring gene CCM2 scaffold protein

Genomic regions, transcripts, and products

General protein information

Preferred Names
neurotrophin receptor associated death domain
Names
nerve growth factor receptor (TNFR superfamily, member 16)
p75-like apoptosis-inducing death domain protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001007998.4NP_001007999.2  neurotrophin receptor associated death domain precursor

    Status: PROVISIONAL

    Source sequence(s)
    AAMC04000006
    UniProtKB/TrEMBL
    F7D171, Q66JK7
    Related
    ENSXETP00000051462.4, ENSXETT00000051462.5
    Conserved Domains (3) summary
    cd08311
    Location:302381
    Death_p75NR; Death domain of p75 Neurotrophin Receptor
    cd13416
    Location:22181
    TNFRSF16; Tumor necrosis factor receptor superfamily member 16 (TNFRSF16), also known as p75 neurotrophin receptor (p75NTR) or CD271
    pfam18422
    Location:216251
    TNFR_16_TM; Tumor necrosis factor receptor member 16 trans-membrane domain

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030682.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    12415994..12434178 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)