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churc1 churchill domain containing 1 [ Danio rerio (zebrafish) ]

Gene ID: 492508, updated on 3-Oct-2019

Summary

Official Symbol
churc1provided by ZNC
Official Full Name
churchill domain containing 1provided by ZNC
Primary source
ZFIN:ZDB-GENE-041001-150
See related
Ensembl:ENSDARG00000010831
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
Also known as
zgc:101863; si:dkey-12h9.10
Orthologs

Genomic context

See churc1 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
4
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 20 NC_007131.7 (25929440..25934488, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 20 NC_007131.6 (26030350..26035358, complement)
103 previous assembly Zv9 (GCF_000002035.4) 20 NC_007131.5 (25959047..25964095, complement)

Chromosome 20 - NC_007131.7Genomic Context describing neighboring genes Neighboring gene solute carrier family 35 member F6 Neighboring gene tau tubulin kinase 2b Neighboring gene uncharacterized LOC101885405 Neighboring gene zinc finger protein 106b Neighboring gene uncharacterized LOC110438178 Neighboring gene calpain 3b Neighboring gene transfer RNA leucine (anticodon CAA)

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

General gene information

Markers

Homology

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
metal ion binding IEA
Inferred from Electronic Annotation
more info
 
zinc ion binding IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
protein Churchill
Names
chch

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001007380.1NP_001007381.1  protein Churchill

    See identical proteins and their annotated locations for NP_001007381.1

    Status: PROVISIONAL

    Source sequence(s)
    BC085457
    UniProtKB/Swiss-Prot
    Q5U3N7
    Related
    ENSDARP00000022916.6, ENSDART00000005590.7
    Conserved Domains (1) summary
    pfam06573
    Location:1111
    Churchill; Churchill protein

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007131.7 Reference GRCz11 Primary Assembly

    Range
    25929440..25934488 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021468411.1XP_021324086.1  protein Churchill isoform X1

    Conserved Domains (1) summary
    pfam06573
    Location:189
    Churchill; Churchill protein

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018395074.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    44821..49829 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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