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The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference ROS_Cfam_1.0
Genomic
-
NC_051813.1 Reference ROS_Cfam_1.0
- Range
-
55653903..55681136 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038678355.1 → XP_038534283.1 volume-regulated anion channel subunit LRRC8A
- UniProtKB/TrEMBL
- A0A8C0LC31, A0A8I3PQW0, A0A8I3PV35
- Related
- ENSCAFP00845035233.1, ENSCAFT00845044958.1
- Conserved Domains (4) summary
-
- COG4886
Location:568 → 780
- LRR; Leucine-rich repeat (LRR) protein [Transcription]
- sd00033
Location:546 → 568
- LRR_RI; leucine-rich repeat [structural motif]
- NF033189
Location:379 → 713
- internalin_A; class 1 internalin InlA
- pfam12534
Location:1 → 340
- Pannexin_like; Pannexin-like TM region of LRRC8
-
XM_038678357.1 → XP_038534285.1 volume-regulated anion channel subunit LRRC8A
- UniProtKB/TrEMBL
- A0A8C0LC31, A0A8I3PQW0, A0A8I3PV35
- Conserved Domains (4) summary
-
- COG4886
Location:568 → 780
- LRR; Leucine-rich repeat (LRR) protein [Transcription]
- sd00033
Location:546 → 568
- LRR_RI; leucine-rich repeat [structural motif]
- NF033189
Location:379 → 713
- internalin_A; class 1 internalin InlA
- pfam12534
Location:1 → 340
- Pannexin_like; Pannexin-like TM region of LRRC8
-
XM_038678356.1 → XP_038534284.1 volume-regulated anion channel subunit LRRC8A
- UniProtKB/TrEMBL
- A0A8C0LC31, A0A8I3PQW0, A0A8I3PV35
- Conserved Domains (4) summary
-
- COG4886
Location:568 → 780
- LRR; Leucine-rich repeat (LRR) protein [Transcription]
- sd00033
Location:546 → 568
- LRR_RI; leucine-rich repeat [structural motif]
- NF033189
Location:379 → 713
- internalin_A; class 1 internalin InlA
- pfam12534
Location:1 → 340
- Pannexin_like; Pannexin-like TM region of LRRC8
-
XM_038678358.1 → XP_038534286.1 volume-regulated anion channel subunit LRRC8A
- UniProtKB/TrEMBL
- A0A8C0LC31, A0A8I3PQW0, A0A8I3PV35
- Conserved Domains (4) summary
-
- COG4886
Location:568 → 780
- LRR; Leucine-rich repeat (LRR) protein [Transcription]
- sd00033
Location:546 → 568
- LRR_RI; leucine-rich repeat [structural motif]
- NF033189
Location:379 → 713
- internalin_A; class 1 internalin InlA
- pfam12534
Location:1 → 340
- Pannexin_like; Pannexin-like TM region of LRRC8
Alternate UMICH_Zoey_3.1
Genomic
-
NC_049269.1 Alternate UMICH_Zoey_3.1
- Range
-
54414997..54442249 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038487200.1 → XP_038343128.1
- Conserved Domains (4) summary
-
- COG4886
Location:568 → 780
- LRR; Leucine-rich repeat (LRR) protein [Transcription]
- sd00033
Location:546 → 568
- LRR_RI; leucine-rich repeat [structural motif]
- NF033189
Location:379 → 713
- internalin_A; class 1 internalin InlA
- pfam12534
Location:1 → 340
- Pannexin_like; Pannexin-like TM region of LRRC8
-
XM_038487202.1 → XP_038343130.1
- Conserved Domains (4) summary
-
- COG4886
Location:568 → 780
- LRR; Leucine-rich repeat (LRR) protein [Transcription]
- sd00033
Location:546 → 568
- LRR_RI; leucine-rich repeat [structural motif]
- NF033189
Location:379 → 713
- internalin_A; class 1 internalin InlA
- pfam12534
Location:1 → 340
- Pannexin_like; Pannexin-like TM region of LRRC8
-
XM_038487201.1 → XP_038343129.1
- Conserved Domains (4) summary
-
- COG4886
Location:568 → 780
- LRR; Leucine-rich repeat (LRR) protein [Transcription]
- sd00033
Location:546 → 568
- LRR_RI; leucine-rich repeat [structural motif]
- NF033189
Location:379 → 713
- internalin_A; class 1 internalin InlA
- pfam12534
Location:1 → 340
- Pannexin_like; Pannexin-like TM region of LRRC8
-
XM_038487203.1 → XP_038343131.1
- Conserved Domains (4) summary
-
- COG4886
Location:568 → 780
- LRR; Leucine-rich repeat (LRR) protein [Transcription]
- sd00033
Location:546 → 568
- LRR_RI; leucine-rich repeat [structural motif]
- NF033189
Location:379 → 713
- internalin_A; class 1 internalin InlA
- pfam12534
Location:1 → 340
- Pannexin_like; Pannexin-like TM region of LRRC8
Alternate UNSW_CanFamBas_1.0
Genomic
-
NC_049750.1 Alternate UNSW_CanFamBas_1.0
- Range
-
54727390..54754601 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038613052.1 → XP_038468980.1
- Conserved Domains (4) summary
-
- COG4886
Location:568 → 780
- LRR; Leucine-rich repeat (LRR) protein [Transcription]
- sd00033
Location:546 → 568
- LRR_RI; leucine-rich repeat [structural motif]
- NF033189
Location:379 → 713
- internalin_A; class 1 internalin InlA
- pfam12534
Location:1 → 340
- Pannexin_like; Pannexin-like TM region of LRRC8
-
XM_038613055.1 → XP_038468983.1
- Conserved Domains (4) summary
-
- COG4886
Location:568 → 780
- LRR; Leucine-rich repeat (LRR) protein [Transcription]
- sd00033
Location:546 → 568
- LRR_RI; leucine-rich repeat [structural motif]
- NF033189
Location:379 → 713
- internalin_A; class 1 internalin InlA
- pfam12534
Location:1 → 340
- Pannexin_like; Pannexin-like TM region of LRRC8
-
XM_038613053.1 → XP_038468981.1
- Conserved Domains (4) summary
-
- COG4886
Location:568 → 780
- LRR; Leucine-rich repeat (LRR) protein [Transcription]
- sd00033
Location:546 → 568
- LRR_RI; leucine-rich repeat [structural motif]
- NF033189
Location:379 → 713
- internalin_A; class 1 internalin InlA
- pfam12534
Location:1 → 340
- Pannexin_like; Pannexin-like TM region of LRRC8
-
XM_038613056.1 → XP_038468984.1
- Conserved Domains (4) summary
-
- COG4886
Location:568 → 780
- LRR; Leucine-rich repeat (LRR) protein [Transcription]
- sd00033
Location:546 → 568
- LRR_RI; leucine-rich repeat [structural motif]
- NF033189
Location:379 → 713
- internalin_A; class 1 internalin InlA
- pfam12534
Location:1 → 340
- Pannexin_like; Pannexin-like TM region of LRRC8
Alternate UU_Cfam_GSD_1.0
Genomic
-
NC_049230.1 Alternate UU_Cfam_GSD_1.0
- Range
-
54820897..54848149 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038549108.1 → XP_038405036.1 volume-regulated anion channel subunit LRRC8A
- UniProtKB/TrEMBL
- A0A8C0LC31, A0A8I3PQW0, A0A8I3PV35
- Conserved Domains (4) summary
-
- COG4886
Location:568 → 780
- LRR; Leucine-rich repeat (LRR) protein [Transcription]
- sd00033
Location:546 → 568
- LRR_RI; leucine-rich repeat [structural motif]
- NF033189
Location:379 → 713
- internalin_A; class 1 internalin InlA
- pfam12534
Location:1 → 340
- Pannexin_like; Pannexin-like TM region of LRRC8
-
XM_038549110.1 → XP_038405038.1 volume-regulated anion channel subunit LRRC8A
- UniProtKB/TrEMBL
- A0A8C0LC31, A0A8I3PQW0, A0A8I3PV35
- Conserved Domains (4) summary
-
- COG4886
Location:568 → 780
- LRR; Leucine-rich repeat (LRR) protein [Transcription]
- sd00033
Location:546 → 568
- LRR_RI; leucine-rich repeat [structural motif]
- NF033189
Location:379 → 713
- internalin_A; class 1 internalin InlA
- pfam12534
Location:1 → 340
- Pannexin_like; Pannexin-like TM region of LRRC8
-
XM_038549109.1 → XP_038405037.1 volume-regulated anion channel subunit LRRC8A
- UniProtKB/TrEMBL
- A0A8C0LC31, A0A8I3PQW0, A0A8I3PV35
- Conserved Domains (4) summary
-
- COG4886
Location:568 → 780
- LRR; Leucine-rich repeat (LRR) protein [Transcription]
- sd00033
Location:546 → 568
- LRR_RI; leucine-rich repeat [structural motif]
- NF033189
Location:379 → 713
- internalin_A; class 1 internalin InlA
- pfam12534
Location:1 → 340
- Pannexin_like; Pannexin-like TM region of LRRC8
-
XM_038549111.1 → XP_038405039.1 volume-regulated anion channel subunit LRRC8A
- UniProtKB/TrEMBL
- A0A8C0LC31, A0A8I3PQW0, A0A8I3PV35
- Conserved Domains (4) summary
-
- COG4886
Location:568 → 780
- LRR; Leucine-rich repeat (LRR) protein [Transcription]
- sd00033
Location:546 → 568
- LRR_RI; leucine-rich repeat [structural motif]
- NF033189
Location:379 → 713
- internalin_A; class 1 internalin InlA
- pfam12534
Location:1 → 340
- Pannexin_like; Pannexin-like TM region of LRRC8
Alternate Dog10K_Boxer_Tasha Primary Assembly
Genomic
-
NC_006591.4 Alternate Dog10K_Boxer_Tasha Primary Assembly
- Range
-
53928394..53955628 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_005625263.4 → XP_005625320.1 volume-regulated anion channel subunit LRRC8A
See identical proteins and their annotated locations for XP_005625320.1
- UniProtKB/TrEMBL
- A0A8C0LC31, A0A8I3PQW0, A0A8I3PV35
- Conserved Domains (4) summary
-
- COG4886
Location:568 → 780
- LRR; Leucine-rich repeat (LRR) protein [Transcription]
- sd00033
Location:546 → 568
- LRR_RI; leucine-rich repeat [structural motif]
- NF033189
Location:379 → 713
- internalin_A; class 1 internalin InlA
- pfam12534
Location:1 → 340
- Pannexin_like; Pannexin-like TM region of LRRC8
-
XM_038617531.1 → XP_038473459.1 volume-regulated anion channel subunit LRRC8A
- UniProtKB/TrEMBL
- A0A8C0LC31, A0A8I3PQW0, A0A8I3PV35
- Conserved Domains (4) summary
-
- COG4886
Location:568 → 780
- LRR; Leucine-rich repeat (LRR) protein [Transcription]
- sd00033
Location:546 → 568
- LRR_RI; leucine-rich repeat [structural motif]
- NF033189
Location:379 → 713
- internalin_A; class 1 internalin InlA
- pfam12534
Location:1 → 340
- Pannexin_like; Pannexin-like TM region of LRRC8
-
XM_005625265.4 → XP_005625322.1 volume-regulated anion channel subunit LRRC8A
See identical proteins and their annotated locations for XP_005625322.1
- UniProtKB/TrEMBL
- A0A8C0LC31, A0A8I3PQW0, A0A8I3PV35
- Conserved Domains (4) summary
-
- COG4886
Location:568 → 780
- LRR; Leucine-rich repeat (LRR) protein [Transcription]
- sd00033
Location:546 → 568
- LRR_RI; leucine-rich repeat [structural motif]
- NF033189
Location:379 → 713
- internalin_A; class 1 internalin InlA
- pfam12534
Location:1 → 340
- Pannexin_like; Pannexin-like TM region of LRRC8
-
XM_548430.6 → XP_548430.2 volume-regulated anion channel subunit LRRC8A
See identical proteins and their annotated locations for XP_548430.2
- UniProtKB/TrEMBL
- A0A8C0LC31, A0A8I3PQW0, A0A8I3PV35
- Conserved Domains (4) summary
-
- COG4886
Location:568 → 780
- LRR; Leucine-rich repeat (LRR) protein [Transcription]
- sd00033
Location:546 → 568
- LRR_RI; leucine-rich repeat [structural motif]
- NF033189
Location:379 → 713
- internalin_A; class 1 internalin InlA
- pfam12534
Location:1 → 340
- Pannexin_like; Pannexin-like TM region of LRRC8