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B4GALNT2 beta-1,4-N-acetyl-galactosaminyltransferase 2 [ Canis lupus familiaris (dog) ]

Gene ID: 491067, updated on 5-Mar-2024

Summary

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Official Symbol
B4GALNT2provided by VGNC
Official Full Name
beta-1,4-N-acetyl-galactosaminyltransferase 2provided by VGNC
Primary source
VGNC:VGNC:38346
See related
Ensembl:ENSCAFG00845010693
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See B4GALNT2 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
11
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 9 NC_051813.1 (26090187..26142032)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 9 NC_006591.4 (24777866..24805610)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 9 NC_049230.1 (25246386..25297787)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 9 NC_049269.1 (24858766..24909924)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 9 NC_049750.1 (25117444..25169101)

Chromosome 9 - NC_051813.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene insulin like growth factor 2 mRNA binding protein 1 Neighboring gene prohibitin-like Neighboring gene U6 spliceosomal RNA Neighboring gene transfer RNA glutamine (anticodon UUG) Neighboring gene G protein subunit gamma transducin 2 Neighboring gene ABI family member 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in UDP-N-acetylgalactosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in UDP-N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4 N-acetylgalactosaminyltransferase 2
XP_022279620.2
XP_038341760.1
XP_038403539.1
XP_038467513.1
XP_038532710.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051813.1 Reference ROS_Cfam_1.0

    Range
    26090187..26142032
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038676782.1 → XP_038532710.1  beta-1,4 N-acetylgalactosaminyltransferase 2 isoform X1

    UniProtKB/TrEMBL
    A0A8C0S240, A0A8I3NFY5
    Related
    ENSCAFP00845014744.1, ENSCAFT00845018876.1
    Conserved Domains (1) summary
    pfam00535
    Location:260 → 366
    Glycos_transf_2; Glycosyl transferase family 2

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049269.1 Alternate UMICH_Zoey_3.1

    Range
    24858766..24909924
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038485832.1 → XP_038341760.1  beta-1,4 N-acetylgalactosaminyltransferase 2 isoform X1

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049750.1 Alternate UNSW_CanFamBas_1.0

    Range
    25117444..25169101
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038611585.1 → XP_038467513.1  beta-1,4 N-acetylgalactosaminyltransferase 2 isoform X1

    Conserved Domains (1) summary
    pfam00535
    Location:260 → 366
    Glycos_transf_2; Glycosyl transferase family 2

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049230.1 Alternate UU_Cfam_GSD_1.0

    Range
    25246386..25297787
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038547611.1 → XP_038403539.1  beta-1,4 N-acetylgalactosaminyltransferase 2 isoform X1

    UniProtKB/TrEMBL
    A0A8C0S240

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006591.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    24777866..24805610
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022423912.2 → XP_022279620.2  beta-1,4 N-acetylgalactosaminyltransferase 2 isoform X2

    UniProtKB/TrEMBL
    A0A8P0SLB2
    Conserved Domains (2) summary
    pfam00535
    Location:224 → 330
    Glycos_transf_2; Glycosyl transferase family 2
    cl11394
    Location:282 → 394
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
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