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VRTN vertebrae development associated [ Canis lupus familiaris (dog) ]

Gene ID: 490782, updated on 27-Jun-2026
Official Symbol
VRTNprovided by VGNC
Official Full Name
vertebrae development associatedprovided by VGNC
Primary source
VGNC:VGNC:48305
See related
RGD:12130501
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
all
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See VRTN in Genome Data Viewer
Location:
chromosome: 8
Exon count:
2
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 8 NC_051812.1 (47764122..47773650)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 8 NC_006590.4 (47221284..47230754)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 8 NC_049229.1 (47841642..47851102)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 8 NC_049268.1 (47433026..47442487)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 8 NC_049749.1 (47454368..47463856)

Chromosome 8 - NC_051812.1Genomic Context describing neighboring genes Neighboring gene visual system homeobox 2 Neighboring gene ATP binding cassette subfamily D member 4 Neighboring gene synapse differentiation inducing 1 like Neighboring gene NPC intracellular cholesterol transporter 2

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of chromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
vertnin
Names
vertebrae development homolog (pig)

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051812.1 Reference ROS_Cfam_1.0

    Range
    47764122..47773650
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038672971.1 → XP_038528899.1  vertnin

    UniProtKB/TrEMBL
    A0A8I3NVJ1
    Conserved Domains (2) summary
    PHA03247
    Location:404 → 612
    PHA03247; large tegument protein UL36; Provisional
    NF033516
    Location:271 → 350
    transpos_IS3; IS3 family transposase

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049268.1 Alternate UMICH_Zoey_3.1

    Range
    47433026..47442487
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038484472.1 → XP_038340400.1  

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049749.1 Alternate UNSW_CanFamBas_1.0

    Range
    47454368..47463856
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038608171.1 → XP_038464099.1  

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049229.1 Alternate UU_Cfam_GSD_1.0

    Range
    47841642..47851102
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038544047.1 → XP_038399975.1  vertnin

    UniProtKB/TrEMBL
    A0A8C0QUL9, A0A8I3NVJ1

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006590.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    47221284..47230754
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022422491.2 → XP_022278199.1  vertnin

    UniProtKB/TrEMBL
    A0A8C0QUL9, A0A8I3NVJ1
    Conserved Domains (2) summary
    cl21459
    Location:272 → 303
    HTH; Helix-turn-helix domains
    cl26464
    Location:404 → 627
    Atrophin-1; Atrophin-1 family
Nucleotide Protein
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