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B4GALT6 beta-1,4-galactosyltransferase 6 [ Canis lupus familiaris (dog) ]

Gene ID: 490499, updated on 5-Mar-2024

Summary

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Official Symbol
B4GALT6provided by VGNC
Official Full Name
beta-1,4-galactosyltransferase 6provided by VGNC
Primary source
VGNC:VGNC:38354
See related
Ensembl:ENSCAFG00845010375
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7
Exon count:
11
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 7 NC_051811.1 (57834554..57902751)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 7 NC_006589.4 (57286934..57354734)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 7 NC_049228.1 (57826294..57894519)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 7 NC_049267.1 (57511630..57579326)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 7 NC_049748.1 (57537715..57605342)

Chromosome 7 - NC_051811.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119876454 Neighboring gene trafficking protein particle complex subunit 8 Neighboring gene uncharacterized LOC111096784 Neighboring gene transthyretin Neighboring gene desmoglein 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-galactose:glucosylceramide beta-1,4-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycosphingolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-galactosyltransferase 6
XP_022277215.1
XP_038338097.1
XP_038338098.1
XP_038338099.1
XP_038338100.1
XP_038399529.1
XP_038399530.1
XP_038399531.1
XP_038399532.1
XP_038431528.1
XP_038431555.1
XP_038463651.1
XP_038463652.1
XP_038463654.1
XP_038463655.1
XP_038528332.1
XP_038528333.1
XP_038528334.1
XP_038528335.1
XP_547621.2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051811.1 Reference ROS_Cfam_1.0

    Range
    57834554..57902751
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038672404.1 → XP_038528332.1  beta-1,4-galactosyltransferase 6 isoform X1

    UniProtKB/TrEMBL
    A0A8C0RA34, A0A8I3NFU6
    Related
    ENSCAFP00845014262.1, ENSCAFT00845018279.1
    Conserved Domains (1) summary
    cd00899
    Location:248 → 464
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  2. XM_038672406.1 → XP_038528334.1  beta-1,4-galactosyltransferase 6 isoform X3

    UniProtKB/TrEMBL
    A0A8C0SE63
    Related
    ENSCAFP00845014334.1, ENSCAFT00845018362.1
    Conserved Domains (1) summary
    cd00899
    Location:216 → 432
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  3. XM_038672405.1 → XP_038528333.1  beta-1,4-galactosyltransferase 6 isoform X2

    UniProtKB/TrEMBL
    A0A8C0KJT1, A0A8C0R060, A0A8C0SE64, A0A8C0SED2, A0A8I3NRE3, A0A8I3RXZ1, A0A8P0NUP6, A0A8P0PP64
    Related
    ENSCAFP00845014404.1, ENSCAFT00845018453.1
    Conserved Domains (1) summary
    cd00899
    Location:155 → 371
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  4. XM_038672407.1 → XP_038528335.1  beta-1,4-galactosyltransferase 6 isoform X4

    UniProtKB/TrEMBL
    A0A8C0LY26, A0A8I3NHG1
    Related
    ENSCAFP00845014464.1, ENSCAFT00845018541.1
    Conserved Domains (1) summary
    cd00899
    Location:132 → 348
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049267.1 Alternate UMICH_Zoey_3.1

    Range
    57511630..57579326
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038482169.1 → XP_038338097.1  beta-1,4-galactosyltransferase 6 isoform X1

    Conserved Domains (1) summary
    cd00899
    Location:248 → 464
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  2. XM_038482171.1 → XP_038338099.1  beta-1,4-galactosyltransferase 6 isoform X3

  3. XM_038482170.1 → XP_038338098.1  beta-1,4-galactosyltransferase 6 isoform X2

    Conserved Domains (1) summary
    cd00899
    Location:155 → 371
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  4. XM_038482172.1 → XP_038338100.1  beta-1,4-galactosyltransferase 6 isoform X4

    Conserved Domains (1) summary
    cd00899
    Location:132 → 348
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049748.1 Alternate UNSW_CanFamBas_1.0

    Range
    57537715..57605342
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038607723.1 → XP_038463651.1  beta-1,4-galactosyltransferase 6 isoform X1

    Conserved Domains (1) summary
    cd00899
    Location:248 → 464
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  2. XM_038607726.1 → XP_038463654.1  beta-1,4-galactosyltransferase 6 isoform X3

    Conserved Domains (1) summary
    cd00899
    Location:216 → 432
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  3. XM_038607724.1 → XP_038463652.1  beta-1,4-galactosyltransferase 6 isoform X2

    Conserved Domains (1) summary
    cd00899
    Location:155 → 371
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  4. XM_038607727.1 → XP_038463655.1  beta-1,4-galactosyltransferase 6 isoform X4

    Conserved Domains (1) summary
    cd00899
    Location:132 → 348
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049228.1 Alternate UU_Cfam_GSD_1.0

    Range
    57826294..57894519
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038543601.1 → XP_038399529.1  beta-1,4-galactosyltransferase 6 isoform X1

    UniProtKB/TrEMBL
    A0A8C0RA34, A0A8I3NFU6
    Conserved Domains (1) summary
    cd00899
    Location:248 → 464
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  2. XM_038543603.1 → XP_038399531.1  beta-1,4-galactosyltransferase 6 isoform X3

    UniProtKB/TrEMBL
    A0A8C0SE63
    Conserved Domains (1) summary
    cd00899
    Location:216 → 432
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  3. XM_038543602.1 → XP_038399530.1  beta-1,4-galactosyltransferase 6 isoform X2

    UniProtKB/TrEMBL
    A0A8C0KJT1, A0A8C0R060, A0A8C0SE64, A0A8C0SED2, A0A8I3NRE3, A0A8I3RXZ1, A0A8P0NUP6, A0A8P0PP64
    Conserved Domains (1) summary
    cd00899
    Location:155 → 371
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  4. XM_038543604.1 → XP_038399532.1  beta-1,4-galactosyltransferase 6 isoform X4

    UniProtKB/TrEMBL
    A0A8C0LY26, A0A8I3NHG1
    Conserved Domains (1) summary
    cd00899
    Location:132 → 348
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006589.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    57286934..57354734
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038575600.1 → XP_038431528.1  beta-1,4-galactosyltransferase 6 isoform X1

    UniProtKB/TrEMBL
    A0A8C0RA34, A0A8I3NFU6
    Conserved Domains (1) summary
    cd00899
    Location:248 → 464
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  2. XM_022421507.2 → XP_022277215.1  beta-1,4-galactosyltransferase 6 isoform X3

    UniProtKB/TrEMBL
    A0A8C0SE63
    Conserved Domains (1) summary
    cd00899
    Location:216 → 432
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  3. XM_547621.7 → XP_547621.2  beta-1,4-galactosyltransferase 6 isoform X2

    UniProtKB/TrEMBL
    A0A8C0KJT1, A0A8C0R060, A0A8C0SE64, A0A8C0SED2, A0A8I3NRE3, A0A8I3RXZ1, A0A8P0NUP6, A0A8P0PP64
    Conserved Domains (1) summary
    cd00899
    Location:155 → 371
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  4. XM_038575627.1 → XP_038431555.1  beta-1,4-galactosyltransferase 6 isoform X4

    UniProtKB/TrEMBL
    A0A8C0LY26, A0A8I3NHG1
    Conserved Domains (1) summary
    cd00899
    Location:132 → 348
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids
Nucleotide Protein
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