U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SWT1 SWT1 RNA endoribonuclease homolog [ Canis lupus familiaris (dog) ]

Gene ID: 490316, updated on 25-Jul-2026
Official Symbol
SWT1provided by VGNC
Official Full Name
SWT1 RNA endoribonuclease homologprovided by VGNC
Primary source
VGNC:VGNC:47011
See related
Ensembl:ENSCAFG00845005058 RGD:12226951
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
all
Try the new Gene page
Try the new Transcripts and proteins table
See SWT1 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
24
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 7 NC_051811.1 (18062669..18157444)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 7 NC_006589.4 (17914272..18009274)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 7 NC_049228.1 (18210975..18306027)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 7 NC_049267.1 (17972143..18067111)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 7 NC_049748.1 (18080011..18174771)

Chromosome 7 - NC_051811.1Genomic Context describing neighboring genes Neighboring gene niban apoptosis regulator 1 Neighboring gene ubiquitin-conjugating enzyme E2 variant 1-like Neighboring gene ring finger protein 2 Neighboring gene tRNA methyltransferase 1 like Neighboring gene influenza virus NS1A binding protein Neighboring gene uncharacterized LOC111096644

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
transcriptional protein SWT1

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051811.1 Reference ROS_Cfam_1.0

    Range
    18062669..18157444
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038671131.1 → XP_038527059.1  transcriptional protein SWT1 isoform X2

    UniProtKB/TrEMBL
    A0A8C0R1N4
    Conserved Domains (1) summary
    cd18727
    Location:389 → 530
    PIN_Swt1-like; VapC-like PIN domain of Saccharomyces cerevisiae Swt1p, human SWT1 and related proteins

  2. XM_038671132.1 → XP_038527060.1  transcriptional protein SWT1 isoform X3

    UniProtKB/TrEMBL
    A0A8C0R1N4
    Conserved Domains (1) summary
    cd18727
    Location:389 → 530
    PIN_Swt1-like; VapC-like PIN domain of Saccharomyces cerevisiae Swt1p, human SWT1 and related proteins

  3. XM_038671133.1 → XP_038527061.1  transcriptional protein SWT1 isoform X4

    UniProtKB/TrEMBL
    A0A8C0R1N4
    Conserved Domains (1) summary
    cd18727
    Location:389 → 530
    PIN_Swt1-like; VapC-like PIN domain of Saccharomyces cerevisiae Swt1p, human SWT1 and related proteins

  4. XM_038671129.1 → XP_038527057.1  transcriptional protein SWT1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0R1N4, A0A8I3MUA5
    Conserved Domains (1) summary
    cd18727
    Location:389 → 530
    PIN_Swt1-like; VapC-like PIN domain of Saccharomyces cerevisiae Swt1p, human SWT1 and related proteins

  5. XM_038671134.1 → XP_038527062.1  transcriptional protein SWT1 isoform X5

    UniProtKB/TrEMBL
    A0A8C0KR10, A0A8I3MS81
    Related
    ENSCAFP00845007150.1, ENSCAFT00845009065.1
    Conserved Domains (1) summary
    cd18727
    Location:363 → 504
    PIN_Swt1-like; VapC-like PIN domain of Saccharomyces cerevisiae Swt1p, human SWT1 and related proteins

  6. XM_038671130.1 → XP_038527058.1  transcriptional protein SWT1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0R1N4, A0A8I3MUA5
    Related
    ENSCAFP00845007163.1, ENSCAFT00845009084.1
    Conserved Domains (1) summary
    cd18727
    Location:389 → 530
    PIN_Swt1-like; VapC-like PIN domain of Saccharomyces cerevisiae Swt1p, human SWT1 and related proteins

RNA

  1. XR_005429717.1 RNA Sequence

  2. XR_005429719.1 RNA Sequence

  3. XR_005429718.1 RNA Sequence

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049267.1 Alternate UMICH_Zoey_3.1

    Range
    17972143..18067111
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038480948.1 → XP_038336876.1  

    Conserved Domains (1) summary
    cd18727
    Location:389 → 530
    PIN_Swt1-like; VapC-like PIN domain of Saccharomyces cerevisiae Swt1p, human SWT1 and related proteins

  2. XM_038480949.1 → XP_038336877.1  

    Conserved Domains (1) summary
    cd18727
    Location:389 → 530
    PIN_Swt1-like; VapC-like PIN domain of Saccharomyces cerevisiae Swt1p, human SWT1 and related proteins

  3. XM_038480950.1 → XP_038336878.1  

    Conserved Domains (1) summary
    cd18727
    Location:389 → 530
    PIN_Swt1-like; VapC-like PIN domain of Saccharomyces cerevisiae Swt1p, human SWT1 and related proteins

  4. XM_038480946.1 → XP_038336874.1  

    Conserved Domains (1) summary
    cd18727
    Location:389 → 530
    PIN_Swt1-like; VapC-like PIN domain of Saccharomyces cerevisiae Swt1p, human SWT1 and related proteins

  5. XM_038480951.1 → XP_038336879.1  

    Conserved Domains (1) summary
    cd18727
    Location:363 → 504
    PIN_Swt1-like; VapC-like PIN domain of Saccharomyces cerevisiae Swt1p, human SWT1 and related proteins

  6. XM_038480947.1 → XP_038336875.1  

    Conserved Domains (1) summary
    cd18727
    Location:389 → 530
    PIN_Swt1-like; VapC-like PIN domain of Saccharomyces cerevisiae Swt1p, human SWT1 and related proteins

RNA

  1. XR_005328162.1 RNA Sequence

  2. XR_005328164.1 RNA Sequence

  3. XR_005328163.1 RNA Sequence

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049748.1 Alternate UNSW_CanFamBas_1.0

    Range
    18080011..18174771
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038606465.1 → XP_038462393.1  

    Conserved Domains (1) summary
    cd18727
    Location:389 → 530
    PIN_Swt1-like; VapC-like PIN domain of Saccharomyces cerevisiae Swt1p, human SWT1 and related proteins

  2. XM_038606466.1 → XP_038462394.1  

    Conserved Domains (1) summary
    cd18727
    Location:389 → 530
    PIN_Swt1-like; VapC-like PIN domain of Saccharomyces cerevisiae Swt1p, human SWT1 and related proteins

  3. XM_038606467.1 → XP_038462395.1  

    Conserved Domains (1) summary
    cd18727
    Location:389 → 530
    PIN_Swt1-like; VapC-like PIN domain of Saccharomyces cerevisiae Swt1p, human SWT1 and related proteins

  4. XM_038606463.1 → XP_038462391.1  

    Conserved Domains (1) summary
    cd18727
    Location:389 → 530
    PIN_Swt1-like; VapC-like PIN domain of Saccharomyces cerevisiae Swt1p, human SWT1 and related proteins

  5. XM_038606468.1 → XP_038462396.1  

    Conserved Domains (1) summary
    cd18727
    Location:363 → 504
    PIN_Swt1-like; VapC-like PIN domain of Saccharomyces cerevisiae Swt1p, human SWT1 and related proteins

  6. XM_038606464.1 → XP_038462392.1  

    Conserved Domains (1) summary
    cd18727
    Location:389 → 530
    PIN_Swt1-like; VapC-like PIN domain of Saccharomyces cerevisiae Swt1p, human SWT1 and related proteins

RNA

  1. XR_005396520.1 RNA Sequence

  2. XR_005396522.1 RNA Sequence

  3. XR_005396521.1 RNA Sequence

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049228.1 Alternate UU_Cfam_GSD_1.0

    Range
    18210975..18306027
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038542301.1 → XP_038398229.1  transcriptional protein SWT1 isoform X2

    UniProtKB/TrEMBL
    A0A8C0R1N4
    Conserved Domains (1) summary
    cd18727
    Location:389 → 530
    PIN_Swt1-like; VapC-like PIN domain of Saccharomyces cerevisiae Swt1p, human SWT1 and related proteins

  2. XM_038542302.1 → XP_038398230.1  transcriptional protein SWT1 isoform X3

    UniProtKB/TrEMBL
    A0A8C0R1N4
    Conserved Domains (1) summary
    cd18727
    Location:389 → 530
    PIN_Swt1-like; VapC-like PIN domain of Saccharomyces cerevisiae Swt1p, human SWT1 and related proteins

  3. XM_038542303.1 → XP_038398231.1  transcriptional protein SWT1 isoform X4

    UniProtKB/TrEMBL
    A0A8C0R1N4
    Conserved Domains (1) summary
    cd18727
    Location:389 → 530
    PIN_Swt1-like; VapC-like PIN domain of Saccharomyces cerevisiae Swt1p, human SWT1 and related proteins

  4. XM_038542299.1 → XP_038398227.1  transcriptional protein SWT1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0R1N4, A0A8I3MUA5
    Conserved Domains (1) summary
    cd18727
    Location:389 → 530
    PIN_Swt1-like; VapC-like PIN domain of Saccharomyces cerevisiae Swt1p, human SWT1 and related proteins

  5. XM_038542304.1 → XP_038398232.1  transcriptional protein SWT1 isoform X5

    UniProtKB/TrEMBL
    A0A8C0KR10, A0A8I3MS81
    Conserved Domains (1) summary
    cd18727
    Location:363 → 504
    PIN_Swt1-like; VapC-like PIN domain of Saccharomyces cerevisiae Swt1p, human SWT1 and related proteins

  6. XM_038542300.1 → XP_038398228.1  transcriptional protein SWT1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0R1N4, A0A8I3MUA5
    Conserved Domains (1) summary
    cd18727
    Location:389 → 530
    PIN_Swt1-like; VapC-like PIN domain of Saccharomyces cerevisiae Swt1p, human SWT1 and related proteins

RNA

  1. XR_005362010.1 RNA Sequence

  2. XR_005362012.1 RNA Sequence

  3. XR_005362011.1 RNA Sequence

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006589.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    17914272..18009274
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038564633.1 → XP_038420561.1  transcriptional protein SWT1 isoform X2

    UniProtKB/TrEMBL
    A0A8C0R1N4
    Conserved Domains (1) summary
    cd18727
    Location:389 → 530
    PIN_Swt1-like; VapC-like PIN domain of Saccharomyces cerevisiae Swt1p, human SWT1 and related proteins

  2. XM_022420972.2 → XP_022276680.1  transcriptional protein SWT1 isoform X3

    UniProtKB/TrEMBL
    A0A8C0R1N4
    Conserved Domains (1) summary
    cd18727
    Location:389 → 530
    PIN_Swt1-like; VapC-like PIN domain of Saccharomyces cerevisiae Swt1p, human SWT1 and related proteins

  3. XM_005622438.4 → XP_005622495.1  transcriptional protein SWT1 isoform X4

    UniProtKB/TrEMBL
    A0A8C0R1N4
    Conserved Domains (1) summary
    cd18727
    Location:389 → 530
    PIN_Swt1-like; VapC-like PIN domain of Saccharomyces cerevisiae Swt1p, human SWT1 and related proteins

  4. XM_005622435.4 → XP_005622492.1  transcriptional protein SWT1 isoform X1

    See identical proteins and their annotated locations for XP_005622492.1

    UniProtKB/TrEMBL
    A0A8C0R1N4, A0A8I3MUA5
    Conserved Domains (1) summary
    cd18727
    Location:389 → 530
    PIN_Swt1-like; VapC-like PIN domain of Saccharomyces cerevisiae Swt1p, human SWT1 and related proteins

  5. XM_005622439.4 → XP_005622496.1  transcriptional protein SWT1 isoform X5

    UniProtKB/TrEMBL
    A0A8C0KR10, A0A8I3MS81
    Conserved Domains (1) summary
    cd18727
    Location:363 → 504
    PIN_Swt1-like; VapC-like PIN domain of Saccharomyces cerevisiae Swt1p, human SWT1 and related proteins

  6. XM_014115141.3 → XP_013970616.1  transcriptional protein SWT1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0R1N4, A0A8I3MUA5
    Conserved Domains (1) summary
    cd18727
    Location:389 → 530
    PIN_Swt1-like; VapC-like PIN domain of Saccharomyces cerevisiae Swt1p, human SWT1 and related proteins

RNA

  1. XR_002628264.2 RNA Sequence

  2. XR_002628265.2 RNA Sequence

  3. XR_292689.4 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials