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LOC489976 transmembrane protein 180 [ Canis lupus familiaris (dog) ]

Gene ID: 489976, updated on 26-Sep-2018

Summary

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Gene symbol
LOC489976
Gene description
transmembrane protein 180
See related
Ensembl:ENSCAFG00000017726
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis

Genomic context

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See LOC489976 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
12
Annotation release Status Assembly Chr Location
105 current CanFam3.1 (GCF_000002285.3) 6 NC_006588.3 (23232246..23289124, complement)

Chromosome 6 - NC_006588.3Genomic Context describing neighboring genes Neighboring gene otoancorin Neighboring gene methyltransferase like 9 Neighboring gene immunoglobulin superfamily member 6 Neighboring gene uncharacterized LOC102153375 Neighboring gene transfer RNA glutamic acid (anticodon CUC) Neighboring gene cerebellar degeneration related protein 2 Neighboring gene RNA polymerase III subunit E

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_006588.3 Chromosome 6 Reference CanFam3.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Submit: New GeneRIF Correction

Variation

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Genotypes

General gene information

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Homology

General protein information

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Preferred Names
transmembrane protein 180

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CanFam3.1 Primary Assembly

Genomic

  1. NC_006588.3 Reference CanFam3.1 Primary Assembly

    Range
    23232246..23289124 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014114550.2 → XP_013970025.1  transmembrane protein 180 isoform X4

    Related
    ENSCAFP00000026151.3, ENSCAFT00000028111.3
    Conserved Domains (1) summary
    cl26210
    Location:12 → 411
    MFS_2; MFS/sugar transport protein

  2. XM_022419956.1 → XP_022275664.1  transmembrane protein 180 isoform X3

    Conserved Domains (1) summary
    cl26210
    Location:12 → 420
    MFS_2; MFS/sugar transport protein

  3. XM_022419957.1 → XP_022275665.1  transmembrane protein 180 isoform X5

    Conserved Domains (1) summary
    cl26210
    Location:12 → 383
    MFS_2; MFS/sugar transport protein

  4. XM_014114548.2 → XP_013970023.1  transmembrane protein 180 isoform X1

    Conserved Domains (1) summary
    cl26210
    Location:12 → 430
    MFS_2; MFS/sugar transport protein

  5. XM_022419954.1 → XP_022275662.1  transmembrane protein 180 isoform X1

    Conserved Domains (1) summary
    cl26210
    Location:12 → 430
    MFS_2; MFS/sugar transport protein

  6. XM_022419955.1 → XP_022275663.1  transmembrane protein 180 isoform X2

    Conserved Domains (1) summary
    cl26210
    Location:12 → 411
    MFS_2; MFS/sugar transport protein

  7. XM_022419958.1 → XP_022275666.1  transmembrane protein 180 isoform X6

    Conserved Domains (1) summary
    cl26210
    Location:12 → 368
    MFS_2; MFS/sugar transport protein
Nucleotide Protein
Heading Accession and Version

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