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TAF6 TATA-box binding protein associated factor 6 [ Canis lupus familiaris (dog) ]

Gene ID: 489846, updated on 18-Sep-2020

Summary

Official Symbol
TAF6provided by VGNC
Official Full Name
TATA-box binding protein associated factor 6provided by VGNC
Primary source
VGNC:VGNC:47085
See related
Ensembl:ENSCAFG00000014601
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs

Genomic context

See TAF6 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
18
Annotation release Status Assembly Chr Location
105 current CanFam3.1 (GCF_000002285.3) 6 NC_006588.3 (9475132..9488611)

Chromosome 6 - NC_006588.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111096488 Neighboring gene paired immunoglobulin-like type 2 receptor alpha Neighboring gene metallo-beta-lactamase domain containing 1 Neighboring gene canopy FGF signaling regulator 4 Neighboring gene adaptor related protein complex 4 subunit mu 1 Neighboring gene minichromosome maintenance complex component 7 Neighboring gene microRNA mir-106b Neighboring gene microRNA mir-93

Genomic regions, transcripts, and products

Genomic Sequence:
NC_006588.3 Chromosome 6 Reference CanFam3.1 Primary Assembly

Pathways from PubChem

General gene information

Homology

General protein information

Preferred Names
transcription initiation factor TFIID subunit 6

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CanFam3.1 Primary Assembly

Genomic

  1. NC_006588.3 Reference CanFam3.1 Primary Assembly

    Range
    9475132..9488611
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005621069.3XP_005621126.1  transcription initiation factor TFIID subunit 6 isoform X2

    See identical proteins and their annotated locations for XP_005621126.1

    UniProtKB/TrEMBL
    J9NS44
    Conserved Domains (1) summary
    cd08050
    Location:15388
    TAF6; TATA Binding Protein (TBP) Associated Factor 6 (TAF6) is one of several TAFs that bind TBP and is involved in forming Transcription Factor IID (TFIID) complex
  2. XM_022419668.1XP_022275376.1  transcription initiation factor TFIID subunit 6 isoform X1

    Conserved Domains (1) summary
    cd08050
    Location:41414
    TAF6; TATA Binding Protein (TBP) Associated Factor 6 (TAF6) is one of several TAFs that bind TBP and is involved in forming Transcription Factor IID (TFIID) complex
  3. XM_005621070.3XP_005621127.1  transcription initiation factor TFIID subunit 6 isoform X2

    See identical proteins and their annotated locations for XP_005621127.1

    UniProtKB/TrEMBL
    J9NS44
    Conserved Domains (1) summary
    cd08050
    Location:15388
    TAF6; TATA Binding Protein (TBP) Associated Factor 6 (TAF6) is one of several TAFs that bind TBP and is involved in forming Transcription Factor IID (TFIID) complex
  4. XM_546964.6XP_546964.2  transcription initiation factor TFIID subunit 6 isoform X2

    See identical proteins and their annotated locations for XP_546964.2

    UniProtKB/TrEMBL
    J9NS44
    Related
    ENSCAFP00000021623.5, ENSCAFT00000023284.5
    Conserved Domains (1) summary
    cd08050
    Location:15388
    TAF6; TATA Binding Protein (TBP) Associated Factor 6 (TAF6) is one of several TAFs that bind TBP and is involved in forming Transcription Factor IID (TFIID) complex
  5. XM_022419669.1XP_022275377.1  transcription initiation factor TFIID subunit 6 isoform X2

    Conserved Domains (1) summary
    cd08050
    Location:15388
    TAF6; TATA Binding Protein (TBP) Associated Factor 6 (TAF6) is one of several TAFs that bind TBP and is involved in forming Transcription Factor IID (TFIID) complex
  6. XM_005621068.3XP_005621125.1  transcription initiation factor TFIID subunit 6 isoform X2

    See identical proteins and their annotated locations for XP_005621125.1

    UniProtKB/TrEMBL
    J9NS44
    Conserved Domains (1) summary
    cd08050
    Location:15388
    TAF6; TATA Binding Protein (TBP) Associated Factor 6 (TAF6) is one of several TAFs that bind TBP and is involved in forming Transcription Factor IID (TFIID) complex
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