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GTF2IRD1 GTF2I repeat domain containing 1 [ Canis lupus familiaris (dog) ]

Gene ID: 489796, updated on 25-Jul-2026
Official Symbol
GTF2IRD1provided by VGNC
Official Full Name
GTF2I repeat domain containing 1provided by VGNC
Primary source
VGNC:VGNC:41550
See related
Ensembl:ENSCAFG00845002189 RGD:12174336
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
all
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See GTF2IRD1 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
29
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 6 NC_051810.1 (5704043..5814869, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 6 NC_006588.4 (7588773..7699430, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 6 NC_049227.1 (5806109..5917143, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 6 NC_049266.1 (5695818..5771513, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 6 NC_049747.1 (5643114..5754077, complement)

Chromosome 6 - NC_051810.1Genomic Context describing neighboring genes Neighboring gene general transcription factor IIi Neighboring gene transmembrane protein 258-like Neighboring gene uncharacterized LOC111096191 Neighboring gene uncharacterized LOC119881501 Neighboring gene microRNA mir-2387 Neighboring gene CAP-Gly domain containing linker protein 2 Neighboring gene replication factor C subunit 2

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
general transcription factor II-I repeat domain-containing protein 1
XP_038333755.1

Length

  • 943

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051810.1 Reference ROS_Cfam_1.0

    Range
    5704043..5814869 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038667870.1 → XP_038523798.1  general transcription factor II-I repeat domain-containing protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A8C0KFZ8
    Conserved Domains (1) summary
    pfam02946
    Location:128 → 202
    GTF2I; GTF2I-like repeat

  2. XM_038667869.1 → XP_038523797.1  general transcription factor II-I repeat domain-containing protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8I3MSD3
    Related
    ENSCAFP00845003101.1, ENSCAFT00845003890.1
    Conserved Domains (1) summary
    pfam02946
    Location:128 → 202
    GTF2I; GTF2I-like repeat

  3. XM_038667868.1 → XP_038523796.1  general transcription factor II-I repeat domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0KG52
    Conserved Domains (1) summary
    pfam02946
    Location:128 → 202
    GTF2I; GTF2I-like repeat

  4. XM_038667866.1 → XP_038523794.1  general transcription factor II-I repeat domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0KG52
    Related
    ENSCAFP00845003126.1, ENSCAFT00845003922.1
    Conserved Domains (1) summary
    pfam02946
    Location:128 → 202
    GTF2I; GTF2I-like repeat

  5. XM_038667867.1 → XP_038523795.1  general transcription factor II-I repeat domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0KG52
    Conserved Domains (1) summary
    pfam02946
    Location:128 → 202
    GTF2I; GTF2I-like repeat

  6. XM_038667871.1 → XP_038523799.1  general transcription factor II-I repeat domain-containing protein 1 isoform X4

    UniProtKB/TrEMBL
    A0A8I3RS27
    Conserved Domains (1) summary
    pfam02946
    Location:128 → 202
    GTF2I; GTF2I-like repeat

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049266.1 Alternate UMICH_Zoey_3.1

    Range
    5695818..5771513 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038477827.1 → XP_038333755.1  

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049747.1 Alternate UNSW_CanFamBas_1.0

    Range
    5643114..5754077 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038603164.1 → XP_038459092.1  

    Conserved Domains (1) summary
    pfam02946
    Location:128 → 202
    GTF2I; GTF2I-like repeat

  2. XM_038603163.1 → XP_038459091.1  

    Conserved Domains (1) summary
    pfam02946
    Location:128 → 202
    GTF2I; GTF2I-like repeat

  3. XM_038603162.1 → XP_038459090.1  

    Conserved Domains (1) summary
    pfam02946
    Location:128 → 202
    GTF2I; GTF2I-like repeat

  4. XM_038603160.1 → XP_038459088.1  

    Conserved Domains (1) summary
    pfam02946
    Location:128 → 202
    GTF2I; GTF2I-like repeat

  5. XM_038603161.1 → XP_038459089.1  

    Conserved Domains (1) summary
    pfam02946
    Location:128 → 202
    GTF2I; GTF2I-like repeat

  6. XM_038603165.1 → XP_038459093.1  

    Conserved Domains (1) summary
    pfam02946
    Location:128 → 202
    GTF2I; GTF2I-like repeat

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049227.1 Alternate UU_Cfam_GSD_1.0

    Range
    5806109..5917143 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038539072.1 → XP_038395000.1  general transcription factor II-I repeat domain-containing protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A8C0KFZ8

  2. XM_038539071.1 → XP_038394999.1  general transcription factor II-I repeat domain-containing protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8I3MSD3

  3. XM_038539070.1 → XP_038394998.1  general transcription factor II-I repeat domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0KG52

  4. XM_038539068.1 → XP_038394996.1  general transcription factor II-I repeat domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0KG52

  5. XM_038539069.1 → XP_038394997.1  general transcription factor II-I repeat domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0KG52

  6. XM_038539073.1 → XP_038395001.1  general transcription factor II-I repeat domain-containing protein 1 isoform X4

    UniProtKB/TrEMBL
    A0A8I3RS27

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006588.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    7588773..7699430 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038536581.1 → XP_038392509.1  general transcription factor II-I repeat domain-containing protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A8C0KFZ8
    Conserved Domains (1) summary
    pfam02946
    Location:128 → 202
    GTF2I; GTF2I-like repeat

  2. XM_022419542.2 → XP_022275250.2  general transcription factor II-I repeat domain-containing protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8I3MSD3
    Conserved Domains (1) summary
    pfam02946
    Location:128 → 202
    GTF2I; GTF2I-like repeat

  3. XM_022419540.2 → XP_022275248.2  general transcription factor II-I repeat domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0KG52
    Conserved Domains (1) summary
    pfam02946
    Location:128 → 202
    GTF2I; GTF2I-like repeat

  4. XM_038536551.1 → XP_038392479.1  general transcription factor II-I repeat domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0KG52
    Conserved Domains (1) summary
    pfam02946
    Location:128 → 202
    GTF2I; GTF2I-like repeat

  5. XM_022419541.2 → XP_022275249.2  general transcription factor II-I repeat domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0KG52
    Conserved Domains (1) summary
    pfam02946
    Location:128 → 202
    GTF2I; GTF2I-like repeat

  6. XM_038536591.1 → XP_038392519.1  general transcription factor II-I repeat domain-containing protein 1 isoform X4

    UniProtKB/TrEMBL
    A0A8I3RS27
    Conserved Domains (1) summary
    pfam02946
    Location:128 → 202
    GTF2I; GTF2I-like repeat
Nucleotide Protein
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