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KCNJ5 potassium inwardly rectifying channel subfamily J member 5 [ Canis lupus familiaris (dog) ]

Gene ID: 489284, updated on 4-Nov-2022

Summary

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Official Symbol
KCNJ5provided by VGNC
Official Full Name
potassium inwardly rectifying channel subfamily J member 5provided by VGNC
Primary source
VGNC:VGNC:42266
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See KCNJ5 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
2
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 5 NC_051809.1 (5699117..5704382, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 5 NC_006587.4 (5799513..5820774, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 5 NC_049226.1 (5770917..5792183, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 5 NC_049265.1 (5758951..5780195, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 5 NC_049746.1 (5736878..5758109, complement)
105 previous assembly CanFam3.1 (GCF_000002285.3) 5 NC_006587.3 (5736544..5760705, complement)

Chromosome 5 - NC_051809.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119871989 Neighboring gene Rho GTPase activating protein 32 Neighboring gene uncharacterized LOC119881475 Neighboring gene potassium inwardly rectifying channel subfamily J member 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

General protein information

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Preferred Names
G protein-activated inward rectifier potassium channel 4; LOW QUALITY PROTEIN: G protein-activated inward rectifier potassium channel 4
Names
potassium voltage-gated channel subfamily J member 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051809.1 Reference ROS_Cfam_1.0

    Range
    5699117..5704382 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038664311.1 → XP_038520239.1  LOW QUALITY PROTEIN: G protein-activated inward rectifier potassium channel 4 isoform X1

    Conserved Domains (2) summary
    pfam01007
    Location:18 → 161
    IRK; Inward rectifier potassium channel
    pfam17655
    Location:169 → 344
    IRK_C; Inward rectifier potassium channel C-terminal domain

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049265.1 Alternate UMICH_Zoey_3.1

    Range
    5758951..5780195 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038474531.1 → XP_038330459.1  G protein-activated inward rectifier potassium channel 4 isoform X2

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049746.1 Alternate UNSW_CanFamBas_1.0

    Range
    5736878..5758109 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038599867.1 → XP_038455795.1  G protein-activated inward rectifier potassium channel 4 isoform X3

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049226.1 Alternate UU_Cfam_GSD_1.0

    Range
    5770917..5792183 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038535660.1 → XP_038391588.1  G protein-activated inward rectifier potassium channel 4 isoform X4

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006587.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    5799513..5820774 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_546402.7 → XP_546402.2  G protein-activated inward rectifier potassium channel 4 isoform X5

    UniProtKB/TrEMBL
    A0A8C0MAQ1, A0A8C0QYV8, A0A8P0SF79, E2RPY4
    Conserved Domains (1) summary
    pfam01007
    Location:54 → 373
    IRK; Inward rectifier potassium channel
Nucleotide Protein
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