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LOC488947 interferon-induced protein with tetratricopeptide repeats 1 [ Canis lupus familiaris (dog) ]

Gene ID: 488947, updated on 27-Jun-2026
Gene symbol
LOC488947
Gene description
interferon-induced protein with tetratricopeptide repeats 1
See related
Ensembl:ENSCAFG00845001939 RGD:12300469
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Also known as
IFIT1
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Try the new Transcripts and proteins table
See LOC488947 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
2
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 4 NC_051808.1 (148587..155614)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 4 NC_006586.4 (168780..175807)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 4 NC_049225.1 (443560..450587)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 4 NC_049264.1 (136002..143029)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 4 NC_049745.1 (243674..250701)

Chromosome 4 - NC_051808.1Genomic Context describing neighboring genes Neighboring gene interferon-induced protein with tetratricopeptide repeats 1B Neighboring gene U4 spliceosomal RNA Neighboring gene interferon-induced protein with tetratricopeptide repeats 5-like Neighboring gene zinc finger protein 248

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Lineage-specific expansion of IFIT gene family: an insight into coevolution with IFN gene family. Liu Y, et al. PLoS One, 2013. PMID 23818968, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in defense response to virus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
interferon-induced protein with tetratricopeptide repeats 1

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051808.1 Reference ROS_Cfam_1.0

    Range
    148587..155614
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038662413.1 → XP_038518341.1  interferon-induced protein with tetratricopeptide repeats 1

    UniProtKB/TrEMBL
    A0A8C0LLL1, A0A8I3MMU4, A0A8I3MR74
    Related
    ENSCAFP00845002702.1, ENSCAFT00845003399.1
    Conserved Domains (2) summary
    TIGR02917
    Location:34 → 467
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:250 → 277
    TPR; TPR repeat [structural motif]

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049264.1 Alternate UMICH_Zoey_3.1

    Range
    136002..143029
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038472764.1 → XP_038328692.1  

    Conserved Domains (2) summary
    TIGR02917
    Location:34 → 467
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:250 → 277
    TPR; TPR repeat [structural motif]

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049745.1 Alternate UNSW_CanFamBas_1.0

    Range
    243674..250701
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038598104.1 → XP_038454032.1  

    Conserved Domains (2) summary
    TIGR02917
    Location:34 → 467
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:250 → 277
    TPR; TPR repeat [structural motif]

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049225.1 Alternate UU_Cfam_GSD_1.0

    Range
    443560..450587
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038533778.1 → XP_038389706.1  interferon-induced protein with tetratricopeptide repeats 1

    UniProtKB/TrEMBL
    A0A8C0LLL1, A0A8I3MMU4, A0A8I3MR74
    Conserved Domains (2) summary
    TIGR02917
    Location:34 → 467
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:250 → 277
    TPR; TPR repeat [structural motif]

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006586.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    168780..175807
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_843271.6 → XP_848364.1  interferon-induced protein with tetratricopeptide repeats 1

    UniProtKB/TrEMBL
    A0A8C0LLL1, A0A8I3MMU4, A0A8I3MR74
    Conserved Domains (2) summary
    TIGR02917
    Location:34 → 467
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:250 → 277
    TPR; TPR repeat [structural motif]
Nucleotide Protein
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