B4GALT3 beta-1,4-galactosyltransferase 3 [Canis lupus familiaris (dog)] - Gene

Summary

Official Symbol: B4GALT3provided by VGNC
Official Full Name: beta-1,4-galactosyltransferase 3provided by VGNC
Primary source: VGNC:VGNC:38351
See related: Ensembl:ENSCAFG00845029537 RGD:12228760
Gene type: protein coding
RefSeq status: MODEL
Organism: Canis lupus familiaris
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs: all
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Genomic context

Location:: chromosome: 38

Exon count:: 8

Annotation release	Status	Assembly	Chr	Location
106	current	ROS_Cfam_1.0 (GCF_014441545.1)	38	NC_051842.1 (21418949..21424705)
106	current	Dog10K_Boxer_Tasha (GCF_000002285.5)	38	NC_006620.4 (21375960..21381714)
106	current	UU_Cfam_GSD_1.0 (GCF_011100685.1)	38	NC_049259.1 (22130365..22136121)
106	current	UMICH_Zoey_3.1 (GCF_005444595.1)	38	NC_049298.1 (21306787..21312540)
106	current	UNSW_CanFamBas_1.0 (GCF_013276365.1)	38	NC_049779.1 (21721206..21726973)

Chromosome 38 - NC_051842.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables glycosyltransferase activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in carbohydrate metabolic process	IEA Inferred from Electronic Annotation more info	PubMed
involved_in galactosylceramide biosynthetic process	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: beta-1,4-galactosyltransferase 3

XP_038304554.1

EC 2.4.1.275

EC 2.4.1.38

EC 2.4.1.90

XP_038304555.1

EC 2.4.1.275

EC 2.4.1.38

EC 2.4.1.90

XP_038304556.1

EC 2.4.1.275

EC 2.4.1.38

EC 2.4.1.90

XP_038304557.1

EC 2.4.1.275

EC 2.4.1.38

EC 2.4.1.90

XP_038319848.1

EC 2.4.1.275

EC 2.4.1.38

EC 2.4.1.90

XP_038319849.1

EC 2.4.1.275

EC 2.4.1.38

EC 2.4.1.90

XP_038319850.1

EC 2.4.1.275

EC 2.4.1.38

EC 2.4.1.90

XP_038319851.1

EC 2.4.1.275

EC 2.4.1.38

EC 2.4.1.90

XP_038378438.1

EC 2.4.1.275

EC 2.4.1.38

EC 2.4.1.90

XP_038378439.1

EC 2.4.1.275

EC 2.4.1.38

EC 2.4.1.90

XP_038378440.1

EC 2.4.1.275

EC 2.4.1.38

EC 2.4.1.90

XP_038378441.1

EC 2.4.1.275

EC 2.4.1.38

EC 2.4.1.90

XP_038442220.1

EC 2.4.1.275

EC 2.4.1.38

EC 2.4.1.90

XP_038442221.1

EC 2.4.1.275

EC 2.4.1.38

EC 2.4.1.90

XP_038442222.1

EC 2.4.1.275

EC 2.4.1.38

EC 2.4.1.90

XP_038442223.1

EC 2.4.1.275

EC 2.4.1.38

EC 2.4.1.90

XP_038506640.1

EC 2.4.1.275

EC 2.4.1.38

EC 2.4.1.90

XP_038506641.1

EC 2.4.1.275

EC 2.4.1.38

EC 2.4.1.90

XP_038506642.1

EC 2.4.1.275

EC 2.4.1.38

EC 2.4.1.90

XP_038506643.1

EC 2.4.1.275

EC 2.4.1.38

EC 2.4.1.90

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

NC_051842.1 Reference ROS_Cfam_1.0

Range

21418949..21424705

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038448629.1 → XP_038304557.1 beta-1,4-galactosyltransferase 3 isoform X1

UniProtKB/TrEMBL

A0A8C0JJF6, A0A8I3Q3V7

Conserved Domains (1) summary

cd00899
Location:125 → 344

b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids
XM_038448627.1 → XP_038304555.1 beta-1,4-galactosyltransferase 3 isoform X1

UniProtKB/TrEMBL

A0A8C0JJF6, A0A8I3Q3V7

Conserved Domains (1) summary

cd00899
Location:125 → 344

b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids
XM_038448628.1 → XP_038304556.1 beta-1,4-galactosyltransferase 3 isoform X1

UniProtKB/TrEMBL

A0A8C0JJF6, A0A8I3Q3V7

Related

ENSCAFP00845041020.1, ENSCAFT00845052297.1

Conserved Domains (1) summary

cd00899
Location:125 → 344

b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids
XM_038448626.1 → XP_038304554.1 beta-1,4-galactosyltransferase 3 isoform X1

UniProtKB/TrEMBL

A0A8C0JJF6, A0A8I3Q3V7

Conserved Domains (1) summary

cd00899
Location:125 → 344

b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

Alternate UMICH_Zoey_3.1

Genomic

NC_049298.1 Alternate UMICH_Zoey_3.1

Range

21306787..21312540

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038522513.1 → XP_038378441.1

Conserved Domains (1) summary

cd00899
Location:126 → 345

b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids
XM_038522511.1 → XP_038378439.1

Conserved Domains (1) summary

cd00899
Location:126 → 345

b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids
XM_038522512.1 → XP_038378440.1

Conserved Domains (1) summary

cd00899
Location:126 → 345

b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids
XM_038522510.1 → XP_038378438.1

Conserved Domains (1) summary

cd00899
Location:126 → 345

b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

Alternate UNSW_CanFamBas_1.0

Genomic

NC_049779.1 Alternate UNSW_CanFamBas_1.0

Range

21721206..21726973

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038650715.1 → XP_038506643.1

Conserved Domains (1) summary

cd00899
Location:125 → 344

b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids
XM_038650713.1 → XP_038506641.1

Conserved Domains (1) summary

cd00899
Location:125 → 344

b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids
XM_038650714.1 → XP_038506642.1

Conserved Domains (1) summary

cd00899
Location:125 → 344

b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids
XM_038650712.1 → XP_038506640.1

Conserved Domains (1) summary

cd00899
Location:125 → 344

b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

Alternate UU_Cfam_GSD_1.0

Genomic

NC_049259.1 Alternate UU_Cfam_GSD_1.0

Range

22130365..22136121

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038586295.1 → XP_038442223.1 beta-1,4-galactosyltransferase 3 isoform X1

UniProtKB/TrEMBL

A0A8C0JJF6, A0A8I3Q3V7

Conserved Domains (1) summary

cd00899
Location:125 → 344

b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids
XM_038586293.1 → XP_038442221.1 beta-1,4-galactosyltransferase 3 isoform X1

UniProtKB/TrEMBL

A0A8C0JJF6, A0A8I3Q3V7

Conserved Domains (1) summary

cd00899
Location:125 → 344

b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids
XM_038586294.1 → XP_038442222.1 beta-1,4-galactosyltransferase 3 isoform X1

UniProtKB/TrEMBL

A0A8C0JJF6, A0A8I3Q3V7

Conserved Domains (1) summary

cd00899
Location:125 → 344

b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids
XM_038586292.1 → XP_038442220.1 beta-1,4-galactosyltransferase 3 isoform X1

UniProtKB/TrEMBL

A0A8C0JJF6, A0A8I3Q3V7

Conserved Domains (1) summary

cd00899
Location:125 → 344

b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

NC_006620.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

Range

21375960..21381714

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038463923.1 → XP_038319851.1 beta-1,4-galactosyltransferase 3 isoform X3

Conserved Domains (1) summary

cd00899
Location:126 → 345

b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids
XM_038463921.1 → XP_038319849.1 beta-1,4-galactosyltransferase 3 isoform X3

Conserved Domains (1) summary

cd00899
Location:126 → 345

b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids
XM_038463922.1 → XP_038319850.1 beta-1,4-galactosyltransferase 3 isoform X3

Conserved Domains (1) summary

cd00899
Location:126 → 345

b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids
XM_038463920.1 → XP_038319848.1 beta-1,4-galactosyltransferase 3 isoform X3

Conserved Domains (1) summary

cd00899
Location:126 → 345

b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids