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SNAI2 snail family transcriptional repressor 2 [ Canis lupus familiaris (dog) ]

Gene ID: 486940, updated on 21-Oct-2017
Official Symbol
SNAI2provided by VGNC
Official Full Name
snail family transcriptional repressor 2provided by VGNC
Primary source
VGNC:VGNC:46585
See related
Ensembl:ENSCAFG00000006638
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Also known as
SLUG
Orthologs
Location:
chromosome: 29
Exon count:
3
Annotation release Status Assembly Chr Location
105 current CanFam3.1 (GCF_000002285.3) 29 NC_006611.3 (1154132..1156653, complement)

Chromosome 29 - NC_006611.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102152773 Neighboring gene EF-hand calcium binding domain 1 Neighboring gene negative elongation factor E pseudogene Neighboring gene phosphoglycerate mutase 1 pseudogene Neighboring gene uncharacterized LOC111093204

Genomic Sequence:
NC_006611.3 Chromosome 29 Reference CanFam3.1 Primary Assembly
  • Adherens junction, organism-specific biosystem (from KEGG)
    Adherens junction, organism-specific biosystemCell-cell adherens junctions (AJs), the most common type of intercellular adhesions, are important for maintaining tissue architecture and cell polarity and can limit cell movement and proliferation....
  • Adherens junction, conserved biosystem (from KEGG)
    Adherens junction, conserved biosystemCell-cell adherens junctions (AJs), the most common type of intercellular adhesions, are important for maintaining tissue architecture and cell polarity and can limit cell movement and proliferation....
  • Hippo signaling pathway, organism-specific biosystem (from KEGG)
    Hippo signaling pathway, organism-specific biosystemHippo signaling is an evolutionarily conserved signaling pathway that controls organ size from flies to humans. In humans and mice, the pathway consists of the MST1 and MST2 kinases, their cofactor S...
  • Hippo signaling pathway, conserved biosystem (from KEGG)
    Hippo signaling pathway, conserved biosystemHippo signaling is an evolutionarily conserved signaling pathway that controls organ size from flies to humans. In humans and mice, the pathway consists of the MST1 and MST2 kinases, their cofactor S...

Markers

Homology

Preferred Names
zinc finger protein SNAI2
Names
snail homolog 2
zinc finger transcription factor snail 2

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001097981.1NP_001091450.1  zinc finger protein SNAI2

    See identical proteins and their annotated locations for NP_001091450.1

    Status: PROVISIONAL

    Source sequence(s)
    EF450456
    UniProtKB/TrEMBL
    A5HBK7
    Related
    ENSCAFP00000009921.3, ENSCAFT00000010700.3
    Conserved Domains (5) summary
    COG5048
    Location:182258
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:187207
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:130150
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:213235
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:200223
    zf-H2C2_2; Zinc-finger double domain

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CanFam3.1 Primary Assembly

Genomic

  1. NC_006611.3 Reference CanFam3.1 Primary Assembly

    Range
    1154132..1156653 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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