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BTRC beta-transducin repeat containing E3 ubiquitin protein ligase [ Canis lupus familiaris (dog) ]

Gene ID: 486851, updated on 25-Jul-2026
Official Symbol
BTRCprovided by VGNC
Official Full Name
beta-transducin repeat containing E3 ubiquitin protein ligaseprovided by VGNC
Primary source
VGNC:VGNC:38564
See related
Ensembl:ENSCAFG00845020497 RGD:12258305
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
all
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Try the new Transcripts and proteins table
See BTRC in Genome Data Viewer
Location:
chromosome: 28
Exon count:
20
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 28 NC_051832.1 (14456360..14641386)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 28 NC_006610.4 (14157392..14341955)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 28 NC_049249.1 (14175408..14359768)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 28 NC_049288.1 (14001856..14186114)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 28 NC_049769.1 (14043050..14227655)

Chromosome 28 - NC_051832.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106557945 Neighboring gene uncharacterized LOC111093036 Neighboring gene DNA polymerase lambda Neighboring gene deleted in primary ciliary dyskinesia homolog Neighboring gene F-box and WD repeat domain containing 4 Neighboring gene uncharacterized LOC119866577

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
F-box/WD repeat-containing protein 1A

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051832.1 Reference ROS_Cfam_1.0

    Range
    14456360..14641386
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038440338.1 → XP_038296266.1  F-box/WD repeat-containing protein 1A isoform X1

    UniProtKB/TrEMBL
    A0A8C0K7M6, A0A8I3PA56
    Related
    ENSCAFP00845028350.1, ENSCAFT00845036230.1
    Conserved Domains (4) summary
    cd00200
    Location:303 → 581
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:306 → 341
    7WD40; WD40 repeat [structural motif]
    pfam12125
    Location:139 → 177
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:181 → 228
    F-box-like

  2. XM_038440343.1 → XP_038296271.1  F-box/WD repeat-containing protein 1A isoform X5

    Conserved Domains (4) summary
    cd00200
    Location:277 → 555
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:280 → 315
    7WD40; WD40 repeat [structural motif]
    pfam12125
    Location:113 → 151
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:155 → 202
    F-box-like

  3. XM_038440344.1 → XP_038296272.1  F-box/WD repeat-containing protein 1A isoform X6

    UniProtKB/TrEMBL
    A0A8I3PIH5
    Related
    ENSCAFP00845028499.1, ENSCAFT00845036410.1
    Conserved Domains (4) summary
    cd00200
    Location:267 → 545
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:270 → 305
    7WD40; WD40 repeat [structural motif]
    pfam12125
    Location:103 → 141
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:145 → 192
    F-box-like

  4. XM_038440347.1 → XP_038296275.1  F-box/WD repeat-containing protein 1A isoform X9

    UniProtKB/TrEMBL
    A0A8I3PCW4
    Related
    ENSCAFP00845028433.1, ENSCAFT00845036328.1
    Conserved Domains (4) summary
    cd00200
    Location:241 → 519
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:244 → 279
    7WD40; WD40 repeat [structural motif]
    pfam12125
    Location:77 → 115
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:119 → 166
    F-box-like

  5. XM_038440339.1 → XP_038296267.1  F-box/WD repeat-containing protein 1A isoform X2

    Conserved Domains (4) summary
    cd00200
    Location:288 → 566
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:291 → 326
    7WD40; WD40 repeat [structural motif]
    pfam12125
    Location:124 → 162
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:166 → 213
    F-box-like

  6. XM_038440346.1 → XP_038296274.1  F-box/WD repeat-containing protein 1A isoform X8

    Conserved Domains (4) summary
    cd00200
    Location:252 → 530
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:255 → 290
    7WD40; WD40 repeat [structural motif]
    pfam12125
    Location:88 → 126
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:130 → 177
    F-box-like

  7. XM_038440341.1 → XP_038296269.1  F-box/WD repeat-containing protein 1A isoform X2

    Conserved Domains (4) summary
    cd00200
    Location:288 → 566
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:291 → 326
    7WD40; WD40 repeat [structural motif]
    pfam12125
    Location:124 → 162
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:166 → 213
    F-box-like

  8. XM_038440342.1 → XP_038296270.1  F-box/WD repeat-containing protein 1A isoform X4

    Conserved Domains (4) summary
    cd00200
    Location:285 → 563
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:288 → 323
    7WD40; WD40 repeat [structural motif]
    pfam12125
    Location:121 → 159
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:163 → 210
    F-box-like

  9. XM_038440340.1 → XP_038296268.1  F-box/WD repeat-containing protein 1A isoform X3

    Conserved Domains (4) summary
    cd00200
    Location:288 → 566
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:291 → 326
    7WD40; WD40 repeat [structural motif]
    pfam12125
    Location:124 → 162
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:166 → 213
    F-box-like

  10. XM_038440345.1 → XP_038296273.1  F-box/WD repeat-containing protein 1A isoform X7

    Conserved Domains (4) summary
    cd00200
    Location:262 → 540
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:265 → 300
    7WD40; WD40 repeat [structural motif]
    pfam12125
    Location:98 → 136
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:140 → 187
    F-box-like

  11. XM_038440348.1 → XP_038296276.1  F-box/WD repeat-containing protein 1A isoform X10

    Conserved Domains (4) summary
    cd00200
    Location:186 → 464
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:189 → 224
    7WD40; WD40 repeat [structural motif]
    pfam12125
    Location:22 → 60
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:64 → 111
    F-box-like

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049288.1 Alternate UMICH_Zoey_3.1

    Range
    14001856..14186114
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038514960.1 → XP_038370888.1  

    Conserved Domains (4) summary
    cd00200
    Location:303 → 581
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:306 → 341
    7WD40; WD40 repeat [structural motif]
    pfam12125
    Location:139 → 177
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:181 → 228
    F-box-like

  2. XM_038514965.1 → XP_038370893.1  

    Conserved Domains (4) summary
    cd00200
    Location:277 → 555
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:280 → 315
    7WD40; WD40 repeat [structural motif]
    pfam12125
    Location:113 → 151
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:155 → 202
    F-box-like

  3. XM_038514966.1 → XP_038370894.1  

    Conserved Domains (4) summary
    cd00200
    Location:267 → 545
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:270 → 305
    7WD40; WD40 repeat [structural motif]
    pfam12125
    Location:103 → 141
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:145 → 192
    F-box-like

  4. XM_038514969.1 → XP_038370897.1  

    Conserved Domains (4) summary
    cd00200
    Location:241 → 519
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:244 → 279
    7WD40; WD40 repeat [structural motif]
    pfam12125
    Location:77 → 115
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:119 → 166
    F-box-like

  5. XM_038514961.1 → XP_038370889.1  

    Conserved Domains (4) summary
    cd00200
    Location:288 → 566
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:291 → 326
    7WD40; WD40 repeat [structural motif]
    pfam12125
    Location:124 → 162
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:166 → 213
    F-box-like

  6. XM_038514968.1 → XP_038370896.1  

    Conserved Domains (4) summary
    cd00200
    Location:252 → 530
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:255 → 290
    7WD40; WD40 repeat [structural motif]
    pfam12125
    Location:88 → 126
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:130 → 177
    F-box-like

  7. XM_038514963.1 → XP_038370891.1  

    Conserved Domains (4) summary
    cd00200
    Location:288 → 566
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:291 → 326
    7WD40; WD40 repeat [structural motif]
    pfam12125
    Location:124 → 162
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:166 → 213
    F-box-like

  8. XM_038514964.1 → XP_038370892.1  

    Conserved Domains (4) summary
    cd00200
    Location:285 → 563
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:288 → 323
    7WD40; WD40 repeat [structural motif]
    pfam12125
    Location:121 → 159
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:163 → 210
    F-box-like

  9. XM_038514962.1 → XP_038370890.1  

    Conserved Domains (4) summary
    cd00200
    Location:288 → 566
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:291 → 326
    7WD40; WD40 repeat [structural motif]
    pfam12125
    Location:124 → 162
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:166 → 213
    F-box-like

  10. XM_038514967.1 → XP_038370895.1  

    Conserved Domains (4) summary
    cd00200
    Location:262 → 540
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:265 → 300
    7WD40; WD40 repeat [structural motif]
    pfam12125
    Location:98 → 136
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:140 → 187
    F-box-like

  11. XM_038514970.1 → XP_038370898.1  

    Conserved Domains (4) summary
    cd00200
    Location:186 → 464
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:189 → 224
    7WD40; WD40 repeat [structural motif]
    pfam12125
    Location:22 → 60
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:64 → 111
    F-box-like

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049769.1 Alternate UNSW_CanFamBas_1.0

    Range
    14043050..14227655
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038642754.1 → XP_038498682.1  

    Conserved Domains (4) summary
    cd00200
    Location:303 → 581
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:306 → 341
    7WD40; WD40 repeat [structural motif]
    pfam12125
    Location:139 → 177
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:181 → 228
    F-box-like

  2. XM_038642759.1 → XP_038498687.1  

    Conserved Domains (4) summary
    cd00200
    Location:277 → 555
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:280 → 315
    7WD40; WD40 repeat [structural motif]
    pfam12125
    Location:113 → 151
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:155 → 202
    F-box-like

  3. XM_038642760.1 → XP_038498688.1  

    Conserved Domains (4) summary
    cd00200
    Location:267 → 545
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:270 → 305
    7WD40; WD40 repeat [structural motif]
    pfam12125
    Location:103 → 141
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:145 → 192
    F-box-like

  4. XM_038642763.1 → XP_038498691.1  

    Conserved Domains (4) summary
    cd00200
    Location:241 → 519
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:244 → 279
    7WD40; WD40 repeat [structural motif]
    pfam12125
    Location:77 → 115
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:119 → 166
    F-box-like

  5. XM_038642755.1 → XP_038498683.1  

    Conserved Domains (4) summary
    cd00200
    Location:288 → 566
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:291 → 326
    7WD40; WD40 repeat [structural motif]
    pfam12125
    Location:124 → 162
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:166 → 213
    F-box-like

  6. XM_038642762.1 → XP_038498690.1  

    Conserved Domains (4) summary
    cd00200
    Location:252 → 530
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:255 → 290
    7WD40; WD40 repeat [structural motif]
    pfam12125
    Location:88 → 126
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:130 → 177
    F-box-like

  7. XM_038642757.1 → XP_038498685.1  

    Conserved Domains (4) summary
    cd00200
    Location:288 → 566
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:291 → 326
    7WD40; WD40 repeat [structural motif]
    pfam12125
    Location:124 → 162
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:166 → 213
    F-box-like

  8. XM_038642758.1 → XP_038498686.1  

    Conserved Domains (4) summary
    cd00200
    Location:285 → 563
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:288 → 323
    7WD40; WD40 repeat [structural motif]
    pfam12125
    Location:121 → 159
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:163 → 210
    F-box-like

  9. XM_038642756.1 → XP_038498684.1  

    Conserved Domains (4) summary
    cd00200
    Location:288 → 566
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:291 → 326
    7WD40; WD40 repeat [structural motif]
    pfam12125
    Location:124 → 162
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:166 → 213
    F-box-like

  10. XM_038642761.1 → XP_038498689.1  

    Conserved Domains (4) summary
    cd00200
    Location:262 → 540
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:265 → 300
    7WD40; WD40 repeat [structural motif]
    pfam12125
    Location:98 → 136
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:140 → 187
    F-box-like

  11. XM_038642764.1 → XP_038498692.1  

    Conserved Domains (4) summary
    cd00200
    Location:186 → 464
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:189 → 224
    7WD40; WD40 repeat [structural motif]
    pfam12125
    Location:22 → 60
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:64 → 111
    F-box-like

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049249.1 Alternate UU_Cfam_GSD_1.0

    Range
    14175408..14359768
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038578563.1 → XP_038434491.1  F-box/WD repeat-containing protein 1A isoform X1

    UniProtKB/TrEMBL
    A0A8C0K7M6, A0A8I3PA56
    Conserved Domains (4) summary
    cd00200
    Location:303 → 581
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:306 → 341
    7WD40; WD40 repeat [structural motif]
    pfam12125
    Location:139 → 177
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:181 → 228
    F-box-like

  2. XM_038578568.1 → XP_038434496.1  F-box/WD repeat-containing protein 1A isoform X5

    Conserved Domains (4) summary
    cd00200
    Location:277 → 555
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:280 → 315
    7WD40; WD40 repeat [structural motif]
    pfam12125
    Location:113 → 151
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:155 → 202
    F-box-like

  3. XM_038578569.1 → XP_038434497.1  F-box/WD repeat-containing protein 1A isoform X6

    UniProtKB/TrEMBL
    A0A8I3PIH5
    Conserved Domains (4) summary
    cd00200
    Location:267 → 545
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:270 → 305
    7WD40; WD40 repeat [structural motif]
    pfam12125
    Location:103 → 141
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:145 → 192
    F-box-like

  4. XM_038578572.1 → XP_038434500.1  F-box/WD repeat-containing protein 1A isoform X9

    UniProtKB/TrEMBL
    A0A8I3PCW4
    Conserved Domains (4) summary
    cd00200
    Location:241 → 519
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:244 → 279
    7WD40; WD40 repeat [structural motif]
    pfam12125
    Location:77 → 115
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:119 → 166
    F-box-like

  5. XM_038578564.1 → XP_038434492.1  F-box/WD repeat-containing protein 1A isoform X2

    Conserved Domains (4) summary
    cd00200
    Location:288 → 566
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:291 → 326
    7WD40; WD40 repeat [structural motif]
    pfam12125
    Location:124 → 162
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:166 → 213
    F-box-like

  6. XM_038578571.1 → XP_038434499.1  F-box/WD repeat-containing protein 1A isoform X8

    Conserved Domains (4) summary
    cd00200
    Location:252 → 530
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:255 → 290
    7WD40; WD40 repeat [structural motif]
    pfam12125
    Location:88 → 126
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:130 → 177
    F-box-like

  7. XM_038578566.1 → XP_038434494.1  F-box/WD repeat-containing protein 1A isoform X2

    Conserved Domains (4) summary
    cd00200
    Location:288 → 566
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:291 → 326
    7WD40; WD40 repeat [structural motif]
    pfam12125
    Location:124 → 162
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:166 → 213
    F-box-like

  8. XM_038578567.1 → XP_038434495.1  F-box/WD repeat-containing protein 1A isoform X4

    Conserved Domains (4) summary
    cd00200
    Location:285 → 563
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:288 → 323
    7WD40; WD40 repeat [structural motif]
    pfam12125
    Location:121 → 159
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:163 → 210
    F-box-like

  9. XM_038578565.1 → XP_038434493.1  F-box/WD repeat-containing protein 1A isoform X3

    Conserved Domains (4) summary
    cd00200
    Location:288 → 566
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:291 → 326
    7WD40; WD40 repeat [structural motif]
    pfam12125
    Location:124 → 162
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:166 → 213
    F-box-like

  10. XM_038578570.1 → XP_038434498.1  F-box/WD repeat-containing protein 1A isoform X7

    Conserved Domains (4) summary
    cd00200
    Location:262 → 540
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:265 → 300
    7WD40; WD40 repeat [structural motif]
    pfam12125
    Location:98 → 136
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:140 → 187
    F-box-like

  11. XM_038578573.1 → XP_038434501.1  F-box/WD repeat-containing protein 1A isoform X10

    Conserved Domains (4) summary
    cd00200
    Location:186 → 464
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:189 → 224
    7WD40; WD40 repeat [structural motif]
    pfam12125
    Location:22 → 60
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:64 → 111
    F-box-like

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006610.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    14157392..14341955
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_543980.6 → XP_543980.3  F-box/WD repeat-containing protein 1A isoform X1

    See identical proteins and their annotated locations for XP_543980.3

    UniProtKB/TrEMBL
    A0A8C0K7M6, A0A8I3PA56
    Conserved Domains (4) summary
    cd00200
    Location:303 → 581
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:306 → 341
    7WD40; WD40 repeat [structural motif]
    pfam12125
    Location:139 → 177
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:181 → 228
    F-box-like

  2. XM_005637638.3 → XP_005637695.1  F-box/WD repeat-containing protein 1A isoform X5

    See identical proteins and their annotated locations for XP_005637695.1

    Conserved Domains (4) summary
    cd00200
    Location:277 → 555
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:280 → 315
    7WD40; WD40 repeat [structural motif]
    pfam12125
    Location:113 → 151
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:155 → 202
    F-box-like

  3. XM_856836.5 → XP_861929.2  F-box/WD repeat-containing protein 1A isoform X6

    See identical proteins and their annotated locations for XP_861929.2

    UniProtKB/TrEMBL
    A0A8I3PIH5
    Conserved Domains (4) summary
    cd00200
    Location:267 → 545
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:270 → 305
    7WD40; WD40 repeat [structural motif]
    pfam12125
    Location:103 → 141
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:145 → 192
    F-box-like

  4. XM_005637639.3 → XP_005637696.1  F-box/WD repeat-containing protein 1A isoform X9

    See identical proteins and their annotated locations for XP_005637696.1

    UniProtKB/TrEMBL
    A0A8I3PCW4
    Conserved Domains (4) summary
    cd00200
    Location:241 → 519
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:244 → 279
    7WD40; WD40 repeat [structural motif]
    pfam12125
    Location:77 → 115
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:119 → 166
    F-box-like

  5. XM_005637636.4 → XP_005637693.1  F-box/WD repeat-containing protein 1A isoform X2

    See identical proteins and their annotated locations for XP_005637693.1

    Conserved Domains (4) summary
    cd00200
    Location:288 → 566
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:291 → 326
    7WD40; WD40 repeat [structural motif]
    pfam12125
    Location:124 → 162
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:166 → 213
    F-box-like

  6. XM_022412096.2 → XP_022267804.1  F-box/WD repeat-containing protein 1A isoform X8

    Conserved Domains (4) summary
    cd00200
    Location:252 → 530
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:255 → 290
    7WD40; WD40 repeat [structural motif]
    pfam12125
    Location:88 → 126
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:130 → 177
    F-box-like

  7. XM_038460384.1 → XP_038316312.1  F-box/WD repeat-containing protein 1A isoform X2

    Conserved Domains (4) summary
    cd00200
    Location:288 → 566
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:291 → 326
    7WD40; WD40 repeat [structural motif]
    pfam12125
    Location:124 → 162
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:166 → 213
    F-box-like

  8. XM_038460385.1 → XP_038316313.1  F-box/WD repeat-containing protein 1A isoform X4

    Conserved Domains (4) summary
    cd00200
    Location:285 → 563
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:288 → 323
    7WD40; WD40 repeat [structural motif]
    pfam12125
    Location:121 → 159
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:163 → 210
    F-box-like

  9. XM_005637637.2 → XP_005637694.1  F-box/WD repeat-containing protein 1A isoform X3

    See identical proteins and their annotated locations for XP_005637694.1

    Conserved Domains (4) summary
    cd00200
    Location:288 → 566
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:291 → 326
    7WD40; WD40 repeat [structural motif]
    pfam12125
    Location:124 → 162
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:166 → 213
    F-box-like

  10. XM_022412095.1 → XP_022267803.1  F-box/WD repeat-containing protein 1A isoform X7

    Conserved Domains (4) summary
    cd00200
    Location:262 → 540
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:265 → 300
    7WD40; WD40 repeat [structural motif]
    pfam12125
    Location:98 → 136
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:140 → 187
    F-box-like

  11. XM_022412100.2 → XP_022267808.1  F-box/WD repeat-containing protein 1A isoform X10

    Conserved Domains (4) summary
    cd00200
    Location:186 → 464
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:189 → 224
    7WD40; WD40 repeat [structural motif]
    pfam12125
    Location:22 → 60
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:64 → 111
    F-box-like
Nucleotide Protein
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