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NECAP1 NECAP endocytosis associated 1 [ Canis lupus familiaris (dog) ]

Gene ID: 486705, updated on 17-Aug-2024

Summary

Official Symbol
NECAP1provided by VGNC
Official Full Name
NECAP endocytosis associated 1provided by VGNC
Primary source
VGNC:VGNC:43716
See related
Ensembl:ENSCAFG00845022681
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
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Genomic context

See NECAP1 in Genome Data Viewer
Location:
chromosome: 27
Exon count:
8
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 27 NC_051831.1 (37814521..37826493)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 27 NC_006609.4 (9143445..9155412, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 27 NC_049248.1 (8630216..8642197, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 27 NC_049287.1 (37689204..37701156)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 27 NC_049768.1 (37730473..37742640)

Chromosome 27 - NC_051831.1Genomic Context describing neighboring genes Neighboring gene forkhead box J2 Neighboring gene complement C3a receptor 1 Neighboring gene C-type lectin domain family 4, member A Neighboring gene C-type lectin domain family 4 member D

Genomic regions, transcripts, and products

General gene information

Markers

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in endocytosis IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
part_of clathrin vesicle coat IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
adaptin ear-binding coat-associated protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051831.1 Reference ROS_Cfam_1.0

    Range
    37814521..37826493
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038439095.1XP_038295023.1  adaptin ear-binding coat-associated protein 1

    UniProtKB/TrEMBL
    A0A8C0JPQ1, A0A8C0P5X9, A0A8I3PGA9, A0A8P0P353
    Related
    ENSCAFP00845031374.1, ENSCAFT00845040066.1
    Conserved Domains (2) summary
    PRK14959
    Location:161275
    PRK14959; DNA polymerase III subunits gamma and tau; Provisional
    pfam07933
    Location:7164
    DUF1681; Protein of unknown function (DUF1681)

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049287.1 Alternate UMICH_Zoey_3.1

    Range
    37689204..37701156
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038513753.1XP_038369681.1  adaptin ear-binding coat-associated protein 1

    Conserved Domains (2) summary
    PRK14959
    Location:161275
    PRK14959; DNA polymerase III subunits gamma and tau; Provisional
    pfam07933
    Location:7164
    DUF1681; Protein of unknown function (DUF1681)

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049768.1 Alternate UNSW_CanFamBas_1.0

    Range
    37730473..37742640
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038641598.1XP_038497526.1  adaptin ear-binding coat-associated protein 1

    Conserved Domains (2) summary
    PRK14959
    Location:161275
    PRK14959; DNA polymerase III subunits gamma and tau; Provisional
    pfam07933
    Location:7164
    DUF1681; Protein of unknown function (DUF1681)

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049248.1 Alternate UU_Cfam_GSD_1.0

    Range
    8630216..8642197 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038576681.1XP_038432609.1  adaptin ear-binding coat-associated protein 1

    UniProtKB/TrEMBL
    A0A8C0JPQ1, A0A8C0P5X9, A0A8I3PGA9, A0A8P0P353
    Conserved Domains (2) summary
    PRK14959
    Location:161275
    PRK14959; DNA polymerase III subunits gamma and tau; Provisional
    pfam07933
    Location:7164
    DUF1681; Protein of unknown function (DUF1681)

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006609.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    9143445..9155412 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_543832.6XP_543832.2  adaptin ear-binding coat-associated protein 1

    UniProtKB/TrEMBL
    A0A8C0JPQ1, A0A8C0P5X9, A0A8I3PGA9, A0A8P0P353
    Conserved Domains (2) summary
    PRK14959
    Location:161275
    PRK14959; DNA polymerase III subunits gamma and tau; Provisional
    pfam07933
    Location:7164
    DUF1681; Protein of unknown function (DUF1681)