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MMP24 matrix metallopeptidase 24 [ Canis lupus familiaris (dog) ]

Gene ID: 485849, updated on 4-Nov-2022

Summary

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Official Symbol
MMP24provided by VGNC
Official Full Name
matrix metallopeptidase 24provided by VGNC
Primary source
VGNC:VGNC:43283
See related
Ensembl:ENSCAFG00845018823
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See MMP24 in Genome Data Viewer
Location:
chromosome: 24
Exon count:
9
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 24 NC_051828.1 (24907564..24950248)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 24 NC_006606.4 (23861305..23903980)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 24 NC_049245.1 (24728551..24771226)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 24 NC_049284.1 (24194434..24237113)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 24 NC_049765.1 (24276885..24332128)
105 previous assembly CanFam3.1 (GCF_000002285.3) 24 NC_006606.3 (24223049..24258082)

Chromosome 24 - NC_051828.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119865659 Neighboring gene ribosomal protein L21 pseudogene Neighboring gene ER degradation enhancing alpha-mannosidase like protein 2 Neighboring gene protein C receptor Neighboring gene MMP24 opposite strand Neighboring gene family with sequence similarity 83 member C Neighboring gene eukaryotic translation initiation factor 6 Neighboring gene ubiquinol-cytochrome c reductase complex assembly factor 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

General protein information

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Preferred Names
matrix metalloproteinase-24

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051828.1 Reference ROS_Cfam_1.0

    Range
    24907564..24950248
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038433609.1 → XP_038289537.1  matrix metalloproteinase-24 isoform X1

    UniProtKB/TrEMBL
    A0A8C0QG61, A0A8I3S3N5
    Related
    ENSCAFP00845026055.1, ENSCAFT00845033282.1
    Conserved Domains (4) summary
    cd00094
    Location:362 → 554
    HX; Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of ...
    pfam00413
    Location:147 → 312
    Peptidase_M10; Matrixin
    pfam01471
    Location:67 → 119
    PG_binding_1; Putative peptidoglycan binding domain
    pfam11857
    Location:560 → 630
    DUF3377; Domain of unknown function (DUF3377)

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049284.1 Alternate UMICH_Zoey_3.1

    Range
    24194434..24237113
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038508787.1 → XP_038364715.1  matrix metalloproteinase-24 isoform X1

    Conserved Domains (4) summary
    cd00094
    Location:362 → 554
    HX; Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of ...
    pfam00413
    Location:147 → 312
    Peptidase_M10; Matrixin
    pfam01471
    Location:67 → 119
    PG_binding_1; Putative peptidoglycan binding domain
    pfam11857
    Location:560 → 630
    DUF3377; Domain of unknown function (DUF3377)

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049765.1 Alternate UNSW_CanFamBas_1.0

    Range
    24276885..24332128
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038635624.1 → XP_038491552.1  matrix metalloproteinase-24 isoform X2

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049245.1 Alternate UU_Cfam_GSD_1.0

    Range
    24728551..24771226
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038572098.1 → XP_038428026.1  matrix metalloproteinase-24 isoform X1

    Conserved Domains (4) summary
    cd00094
    Location:362 → 554
    HX; Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of ...
    pfam00413
    Location:147 → 312
    Peptidase_M10; Matrixin
    pfam01471
    Location:67 → 119
    PG_binding_1; Putative peptidoglycan binding domain
    pfam11857
    Location:560 → 630
    DUF3377; Domain of unknown function (DUF3377)

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006606.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    23861305..23903980
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038457965.1 → XP_038313893.1  matrix metalloproteinase-24 isoform X1

    UniProtKB/TrEMBL
    A0A8C0QG61, A0A8I3S3N5
    Conserved Domains (4) summary
    cd00094
    Location:362 → 554
    HX; Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of ...
    pfam00413
    Location:147 → 312
    Peptidase_M10; Matrixin
    pfam01471
    Location:67 → 119
    PG_binding_1; Putative peptidoglycan binding domain
    pfam11857
    Location:560 → 630
    DUF3377; Domain of unknown function (DUF3377)
Nucleotide Protein
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