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JAG1 jagged canonical Notch ligand 1 [ Canis lupus familiaris (dog) ]

Gene ID: 485769, updated on 18-Sep-2020

Summary

Official Symbol
JAG1provided by VGNC
Official Full Name
jagged canonical Notch ligand 1provided by VGNC
Primary source
VGNC:VGNC:42172
See related
Ensembl:ENSCAFG00000005627
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs

Genomic context

See JAG1 in Genome Data Viewer
Location:
chromosome: 24
Exon count:
26
Annotation release Status Assembly Chr Location
105 current CanFam3.1 (GCF_000002285.3) 24 NC_006606.3 (11656926..11693146)

Chromosome 24 - NC_006606.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106557729 Neighboring gene SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 pseudogene Neighboring gene 60S ribosomal protein L31-like Neighboring gene SLX4 interacting protein Neighboring gene uncharacterized LOC106557694

Genomic regions, transcripts, and products

Genomic Sequence:
NC_006606.3 Chromosome 24 Reference CanFam3.1 Primary Assembly

Pathways from PubChem

General gene information

Markers

Homology

General protein information

Preferred Names
protein jagged-1
Names
jagged 1 (Alagille syndrome)

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CanFam3.1 Primary Assembly

Genomic

  1. NC_006606.3 Reference CanFam3.1 Primary Assembly

    Range
    11656926..11693146
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005634783.3XP_005634840.1  protein jagged-1

    UniProtKB/TrEMBL
    E2QUR0
    Related
    ENSCAFP00000008417.3, ENSCAFT00000009074.4
    Conserved Domains (5) summary
    smart00215
    Location:863930
    VWC_out; von Willebrand factor (vWF) type C domain
    cd00054
    Location:629665
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    pfam00008
    Location:748777
    EGF; EGF-like domain
    pfam01414
    Location:167229
    DSL; Delta serrate ligand
    pfam07657
    Location:32107
    MNNL; N terminus of Notch ligand
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