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SYVN1 synoviolin 1 [ Canis lupus familiaris (dog) ]

Gene ID: 483746, updated on 27-Jun-2026
Official Symbol
SYVN1provided by VGNC
Official Full Name
synoviolin 1provided by VGNC
Primary source
VGNC:VGNC:47055
See related
Ensembl:ENSCAFG00845025988 RGD:12139080
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
all
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Try the new Transcripts and proteins table
See SYVN1 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
17
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 18 NC_051822.1 (53102565..53110749)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 18 NC_006600.4 (50668558..50676741)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 18 NC_049239.1 (52566393..52574578)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 18 NC_049278.1 (52197954..52206134)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 18 NC_049759.1 (51771728..51779906)

Chromosome 18 - NC_051822.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 22 member 20 Neighboring gene calpain 1 Neighboring gene speedy/RINGO cell cycle regulator family member C Neighboring gene mitochondrial ribosomal protein L49 Neighboring gene zinc finger HIT-type containing 2 Neighboring gene FAU ubiquitin like and ribosomal protein S30 fusion

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Markers

Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
E3 ubiquitin-protein ligase synoviolin
XP_013976491.1
XP_013976492.1
XP_013976493.1
XP_013976494.1
XP_013976496.1
XP_038280967.1
XP_038280968.1
XP_038280969.1
XP_038280970.1
XP_038280971.1
XP_038280972.1
XP_038280973.1
XP_038309744.1
XP_038309745.1
XP_038357231.1
XP_038357232.1
XP_038357233.1
XP_038357234.1
XP_038357235.1
XP_038357236.1
XP_038357237.1
XP_038419908.1
XP_038419909.1
XP_038419910.1
XP_038419911.1
XP_038419912.1
XP_038419913.1
XP_038419914.1
XP_038484038.1
XP_038484039.1
XP_038484040.1
XP_038484041.1
XP_038484042.1
XP_038484043.1
XP_038484044.1

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051822.1 Reference ROS_Cfam_1.0

    Range
    53102565..53110749
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038425045.1 → XP_038280973.1  E3 ubiquitin-protein ligase synoviolin isoform X7

    Conserved Domains (1) summary
    COG5243
    Location:66 → 389
    HRD1; HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones]

  2. XM_038425044.1 → XP_038280972.1  E3 ubiquitin-protein ligase synoviolin isoform X6

    UniProtKB/TrEMBL
    A0A8C0KQB2
    Conserved Domains (1) summary
    COG5243
    Location:66 → 389
    HRD1; HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones]

  3. XM_038425043.1 → XP_038280971.1  E3 ubiquitin-protein ligase synoviolin isoform X5

    Conserved Domains (1) summary
    COG5243
    Location:66 → 389
    HRD1; HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones]

  4. XM_038425041.1 → XP_038280969.1  E3 ubiquitin-protein ligase synoviolin isoform X3

    Conserved Domains (1) summary
    COG5243
    Location:66 → 389
    HRD1; HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones]

  5. XM_038425039.1 → XP_038280967.1  E3 ubiquitin-protein ligase synoviolin isoform X1

    UniProtKB/TrEMBL
    A0A8C0KQB2
    Conserved Domains (1) summary
    COG5243
    Location:66 → 389
    HRD1; HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones]

  6. XM_038425042.1 → XP_038280970.1  E3 ubiquitin-protein ligase synoviolin isoform X4

    UniProtKB/TrEMBL
    A0A8C0KQB2
    Related
    ENSCAFP00845036141.1, ENSCAFT00845046033.1
    Conserved Domains (1) summary
    COG5243
    Location:66 → 389
    HRD1; HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones]

  7. XM_038425040.1 → XP_038280968.1  E3 ubiquitin-protein ligase synoviolin isoform X2

    UniProtKB/TrEMBL
    A0A8C0KQB2
    Conserved Domains (1) summary
    COG5243
    Location:65 → 388
    HRD1; HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones]

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049278.1 Alternate UMICH_Zoey_3.1

    Range
    52197954..52206134
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038501309.1 → XP_038357237.1  

    Conserved Domains (1) summary
    COG5243
    Location:66 → 389
    HRD1; HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones]

  2. XM_038501308.1 → XP_038357236.1  

    Conserved Domains (1) summary
    COG5243
    Location:66 → 389
    HRD1; HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones]

  3. XM_038501307.1 → XP_038357235.1  

    Conserved Domains (1) summary
    COG5243
    Location:66 → 389
    HRD1; HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones]

  4. XM_038501305.1 → XP_038357233.1  

    Conserved Domains (1) summary
    COG5243
    Location:66 → 389
    HRD1; HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones]

  5. XM_038501303.1 → XP_038357231.1  

    Conserved Domains (1) summary
    COG5243
    Location:66 → 389
    HRD1; HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones]

  6. XM_038501306.1 → XP_038357234.1  

    Conserved Domains (1) summary
    COG5243
    Location:66 → 389
    HRD1; HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones]

  7. XM_038501304.1 → XP_038357232.1  

    Conserved Domains (1) summary
    COG5243
    Location:65 → 388
    HRD1; HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones]

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049759.1 Alternate UNSW_CanFamBas_1.0

    Range
    51771728..51779906
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038628116.1 → XP_038484044.1  

    Conserved Domains (1) summary
    COG5243
    Location:66 → 389
    HRD1; HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones]

  2. XM_038628115.1 → XP_038484043.1  

    Conserved Domains (1) summary
    COG5243
    Location:66 → 389
    HRD1; HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones]

  3. XM_038628114.1 → XP_038484042.1  

    Conserved Domains (1) summary
    COG5243
    Location:66 → 389
    HRD1; HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones]

  4. XM_038628112.1 → XP_038484040.1  

    Conserved Domains (1) summary
    COG5243
    Location:66 → 389
    HRD1; HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones]

  5. XM_038628110.1 → XP_038484038.1  

    Conserved Domains (1) summary
    COG5243
    Location:66 → 389
    HRD1; HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones]

  6. XM_038628113.1 → XP_038484041.1  

    Conserved Domains (1) summary
    COG5243
    Location:66 → 389
    HRD1; HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones]

  7. XM_038628111.1 → XP_038484039.1  

    Conserved Domains (1) summary
    COG5243
    Location:65 → 388
    HRD1; HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones]

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049239.1 Alternate UU_Cfam_GSD_1.0

    Range
    52566393..52574578
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038563986.1 → XP_038419914.1  E3 ubiquitin-protein ligase synoviolin isoform X7

    Conserved Domains (1) summary
    COG5243
    Location:66 → 389
    HRD1; HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones]

  2. XM_038563985.1 → XP_038419913.1  E3 ubiquitin-protein ligase synoviolin isoform X6

    UniProtKB/TrEMBL
    A0A8C0KQB2
    Conserved Domains (1) summary
    COG5243
    Location:66 → 389
    HRD1; HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones]

  3. XM_038563984.1 → XP_038419912.1  E3 ubiquitin-protein ligase synoviolin isoform X5

    Conserved Domains (1) summary
    COG5243
    Location:66 → 389
    HRD1; HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones]

  4. XM_038563982.1 → XP_038419910.1  E3 ubiquitin-protein ligase synoviolin isoform X3

    Conserved Domains (1) summary
    COG5243
    Location:66 → 389
    HRD1; HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones]

  5. XM_038563980.1 → XP_038419908.1  E3 ubiquitin-protein ligase synoviolin isoform X1

    UniProtKB/TrEMBL
    A0A8C0KQB2
    Conserved Domains (1) summary
    COG5243
    Location:66 → 389
    HRD1; HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones]

  6. XM_038563983.1 → XP_038419911.1  E3 ubiquitin-protein ligase synoviolin isoform X4

    UniProtKB/TrEMBL
    A0A8C0KQB2
    Conserved Domains (1) summary
    COG5243
    Location:66 → 389
    HRD1; HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones]

  7. XM_038563981.1 → XP_038419909.1  E3 ubiquitin-protein ligase synoviolin isoform X2

    UniProtKB/TrEMBL
    A0A8C0KQB2
    Conserved Domains (1) summary
    COG5243
    Location:65 → 388
    HRD1; HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones]

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006600.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    50668558..50676741
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038453817.1 → XP_038309745.1  E3 ubiquitin-protein ligase synoviolin isoform X7

    Conserved Domains (1) summary
    COG5243
    Location:66 → 389
    HRD1; HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones]

  2. XM_038453816.1 → XP_038309744.1  E3 ubiquitin-protein ligase synoviolin isoform X6

    UniProtKB/TrEMBL
    A0A8C0KQB2
    Conserved Domains (1) summary
    COG5243
    Location:66 → 389
    HRD1; HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones]

  3. XM_014121019.3 → XP_013976494.1  E3 ubiquitin-protein ligase synoviolin isoform X5

    Conserved Domains (1) summary
    COG5243
    Location:66 → 389
    HRD1; HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones]

  4. XM_014121017.3 → XP_013976492.1  E3 ubiquitin-protein ligase synoviolin isoform X3

    Conserved Domains (1) summary
    COG5243
    Location:66 → 389
    HRD1; HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones]

  5. XM_014121021.3 → XP_013976496.1  E3 ubiquitin-protein ligase synoviolin isoform X1

    UniProtKB/TrEMBL
    A0A8C0KQB2
    Conserved Domains (1) summary
    COG5243
    Location:66 → 389
    HRD1; HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones]

  6. XM_014121018.3 → XP_013976493.1  E3 ubiquitin-protein ligase synoviolin isoform X4

    UniProtKB/TrEMBL
    A0A8C0KQB2
    Conserved Domains (1) summary
    COG5243
    Location:66 → 389
    HRD1; HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones]

  7. XM_014121016.3 → XP_013976491.1  E3 ubiquitin-protein ligase synoviolin isoform X2

    UniProtKB/TrEMBL
    A0A8C0KQB2
    Conserved Domains (1) summary
    COG5243
    Location:65 → 388
    HRD1; HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones]
Nucleotide Protein
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