The following sections contain reference sequences that belong to a specific genome build. Explain

This section includes genomic Reference Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate assemblies. Model RNAs and proteins are also reported here.

Reference ROS_Cfam_1.0

Genomic

1. NC_051813.1 Reference ROS_Cfam_1.0

   Range

   2179981..2208232 complement

   Download

   GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

1. XM_038675494.1 → XP_038531422.1  caspase recruitment domain-containing protein 14 isoform X3

   UniProtKB/TrEMBL

   A0A8I3NFE1

   Conserved Domains (4) summary

   COG1196
   Location:134 → 409

   Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

   cd00992
   Location:583 → 655

   PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

   cl14633
   Location:19 → 104

   DD; Death Domain Superfamily of protein-protein interaction domains

   cl17036
   Location:680 → 741

   SH3; Src Homology 3 domain superfamily

2. XM_038675491.1 → XP_038531419.1  caspase recruitment domain-containing protein 14 isoform X1

   UniProtKB/TrEMBL

   A0A8I3NFE1

   Conserved Domains (4) summary

   COG1196
   Location:134 → 409

   Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

   cd00992
   Location:583 → 655

   PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

   cl14633
   Location:19 → 104

   DD; Death Domain Superfamily of protein-protein interaction domains

   cl17036
   Location:680 → 741

   SH3; Src Homology 3 domain superfamily

3. XM_038675493.1 → XP_038531421.1  caspase recruitment domain-containing protein 14 isoform X2

   UniProtKB/TrEMBL

   A0A8I3NFE1

   Related

   ENSCAFP00845018557.1, ENSCAFT00845023641.1

   Conserved Domains (4) summary

   COG1196
   Location:134 → 409

   Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

   cd00992
   Location:582 → 654

   PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

   cl14633
   Location:19 → 104

   DD; Death Domain Superfamily of protein-protein interaction domains

   cl17036
   Location:679 → 740

   SH3; Src Homology 3 domain superfamily

4. XM_038675492.1 → XP_038531420.1  caspase recruitment domain-containing protein 14 isoform X1

   UniProtKB/TrEMBL

   A0A8I3NFE1

   Conserved Domains (4) summary

   COG1196
   Location:134 → 409

   Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

   cd00992
   Location:583 → 655

   PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

   cl14633
   Location:19 → 104

   DD; Death Domain Superfamily of protein-protein interaction domains

   cl17036
   Location:680 → 741

   SH3; Src Homology 3 domain superfamily

5. XM_038675495.1 → XP_038531423.1  caspase recruitment domain-containing protein 14 isoform X4

   Conserved Domains (5) summary

   COG1196
   Location:134 → 409

   Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

   cd00992
   Location:583 → 655

   PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

   pfam15694
   Location:752 → 816

   Med26_M; Mediator complex subunit 26 middle domain

   cl14633
   Location:19 → 104

   DD; Death Domain Superfamily of protein-protein interaction domains

   cl17036
   Location:680 → 741

   SH3; Src Homology 3 domain superfamily

Alternate UMICH_Zoey_3.1

Genomic

1. NC_049269.1 Alternate UMICH_Zoey_3.1

   Range

   2203394..2231638 complement

   Download

   GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

1. XM_038484724.1 → XP_038340652.1  

   Conserved Domains (4) summary

   COG1196
   Location:134 → 409

   Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

   cd00992
   Location:583 → 655

   PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

   cl14633
   Location:19 → 104

   DD; Death Domain Superfamily of protein-protein interaction domains

   cl17036
   Location:680 → 741

   SH3; Src Homology 3 domain superfamily

2. XM_038484721.1 → XP_038340649.1  

   Conserved Domains (4) summary

   COG1196
   Location:134 → 409

   Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

   cd00992
   Location:583 → 655

   PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

   cl14633
   Location:19 → 104

   DD; Death Domain Superfamily of protein-protein interaction domains

   cl17036
   Location:680 → 741

   SH3; Src Homology 3 domain superfamily

3. XM_038484723.1 → XP_038340651.1  

   Conserved Domains (4) summary

   COG1196
   Location:134 → 409

   Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

   cd00992
   Location:582 → 654

   PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

   cl14633
   Location:19 → 104

   DD; Death Domain Superfamily of protein-protein interaction domains

   cl17036
   Location:679 → 740

   SH3; Src Homology 3 domain superfamily

4. XM_038484722.1 → XP_038340650.1  

   Conserved Domains (4) summary

   COG1196
   Location:134 → 409

   Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

   cd00992
   Location:583 → 655

   PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

   cl14633
   Location:19 → 104

   DD; Death Domain Superfamily of protein-protein interaction domains

   cl17036
   Location:680 → 741

   SH3; Src Homology 3 domain superfamily

5. XM_038484725.1 → XP_038340653.1  

   Conserved Domains (5) summary

   COG1196
   Location:134 → 409

   Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

   cd00992
   Location:583 → 655

   PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

   pfam15694
   Location:752 → 816

   Med26_M; Mediator complex subunit 26 middle domain

   cl14633
   Location:19 → 104

   DD; Death Domain Superfamily of protein-protein interaction domains

   cl17036
   Location:680 → 741

   SH3; Src Homology 3 domain superfamily

Alternate UNSW_CanFamBas_1.0

Genomic

1. NC_049750.1 Alternate UNSW_CanFamBas_1.0

   Range

   2328838..2357073 complement

   Download

   GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

1. XM_038610378.1 → XP_038466306.1  

   Conserved Domains (4) summary

   COG1196
   Location:134 → 409

   Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

   cd00992
   Location:583 → 655

   PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

   cl14633
   Location:19 → 104

   DD; Death Domain Superfamily of protein-protein interaction domains

   cl17036
   Location:680 → 741

   SH3; Src Homology 3 domain superfamily

2. XM_038610375.1 → XP_038466303.1  

   Conserved Domains (4) summary

   COG1196
   Location:134 → 409

   Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

   cd00992
   Location:583 → 655

   PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

   cl14633
   Location:19 → 104

   DD; Death Domain Superfamily of protein-protein interaction domains

   cl17036
   Location:680 → 741

   SH3; Src Homology 3 domain superfamily

3. XM_038610377.1 → XP_038466305.1  

   Conserved Domains (4) summary

   COG1196
   Location:134 → 409

   Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

   cd00992
   Location:582 → 654

   PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

   cl14633
   Location:19 → 104

   DD; Death Domain Superfamily of protein-protein interaction domains

   cl17036
   Location:679 → 740

   SH3; Src Homology 3 domain superfamily

4. XM_038610376.1 → XP_038466304.1  

   Conserved Domains (4) summary

   COG1196
   Location:134 → 409

   Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

   cd00992
   Location:583 → 655

   PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

   cl14633
   Location:19 → 104

   DD; Death Domain Superfamily of protein-protein interaction domains

   cl17036
   Location:680 → 741

   SH3; Src Homology 3 domain superfamily

5. XM_038610379.1 → XP_038466307.1  

   Conserved Domains (5) summary

   COG1196
   Location:134 → 409

   Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

   cd00992
   Location:583 → 655

   PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

   pfam15694
   Location:752 → 816

   Med26_M; Mediator complex subunit 26 middle domain

   cl14633
   Location:19 → 104

   DD; Death Domain Superfamily of protein-protein interaction domains

   cl17036
   Location:680 → 741

   SH3; Src Homology 3 domain superfamily

Alternate UU_Cfam_GSD_1.0

Genomic

1. NC_049230.1 Alternate UU_Cfam_GSD_1.0

   Range

   2410129..2438381 complement

   Download

   GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

1. XM_038546370.1 → XP_038402298.1  caspase recruitment domain-containing protein 14 isoform X2

   UniProtKB/TrEMBL

   A0A8I3NFE1

2. XM_038546371.1 → XP_038402299.1  caspase recruitment domain-containing protein 14 isoform X3

   UniProtKB/TrEMBL

   A0A8I3NFE1

3. XM_038546368.1 → XP_038402296.1  caspase recruitment domain-containing protein 14 isoform X1

   UniProtKB/TrEMBL

   A0A8I3NFE1

4. XM_038546369.1 → XP_038402297.1  caspase recruitment domain-containing protein 14 isoform X1

   UniProtKB/TrEMBL

   A0A8I3NFE1

5. XM_038546372.1 → XP_038402300.1  caspase recruitment domain-containing protein 14 isoform X4

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

1. NC_006591.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

   Range

   2187504..2215755 complement

   Download

   GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

1. XM_038623753.1 → XP_038479681.1  caspase recruitment domain-containing protein 14 isoform X3

   UniProtKB/TrEMBL

   A0A8I3NFE1

   Conserved Domains (4) summary

   COG1196
   Location:134 → 409

   Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

   cd00992
   Location:583 → 655

   PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

   cl14633
   Location:19 → 104

   DD; Death Domain Superfamily of protein-protein interaction domains

   cl17036
   Location:680 → 741

   SH3; Src Homology 3 domain superfamily

2. XM_038623728.1 → XP_038479656.1  caspase recruitment domain-containing protein 14 isoform X1

   UniProtKB/TrEMBL

   A0A8I3NFE1

   Conserved Domains (4) summary

   COG1196
   Location:134 → 409

   Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

   cd00992
   Location:583 → 655

   PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

   cl14633
   Location:19 → 104

   DD; Death Domain Superfamily of protein-protein interaction domains

   cl17036
   Location:680 → 741

   SH3; Src Homology 3 domain superfamily

3. XM_038623744.1 → XP_038479672.1  caspase recruitment domain-containing protein 14 isoform X2

   UniProtKB/TrEMBL

   A0A8I3NFE1

   Conserved Domains (4) summary

   COG1196
   Location:134 → 409

   Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

   cd00992
   Location:582 → 654

   PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

   cl14633
   Location:19 → 104

   DD; Death Domain Superfamily of protein-protein interaction domains

   cl17036
   Location:679 → 740

   SH3; Src Homology 3 domain superfamily

4. XM_022422641.2 → XP_022278349.1  caspase recruitment domain-containing protein 14 isoform X1

   UniProtKB/TrEMBL

   A0A8I3NFE1

   Conserved Domains (4) summary

   COG1196
   Location:134 → 409

   Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

   cd00992
   Location:583 → 655

   PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

   cl14633
   Location:19 → 104

   DD; Death Domain Superfamily of protein-protein interaction domains

   cl17036
   Location:680 → 741

   SH3; Src Homology 3 domain superfamily

5. XM_038623762.1 → XP_038479690.1  caspase recruitment domain-containing protein 14 isoform X4

   Conserved Domains (5) summary

   COG1196
   Location:134 → 409

   Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

   cd00992
   Location:583 → 655

   PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

   pfam15694
   Location:752 → 816

   Med26_M; Mediator complex subunit 26 middle domain

   cl14633
   Location:19 → 104

   DD; Death Domain Superfamily of protein-protein interaction domains

   cl17036
   Location:680 → 741

   SH3; Src Homology 3 domain superfamily