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ASCL1 achaete-scute family bHLH transcription factor 1 [ Canis lupus familiaris (dog) ]

Gene ID: 482628, updated on 26-Sep-2018

Summary

Official Symbol
ASCL1provided by VGNC
Official Full Name
achaete-scute family bHLH transcription factor 1provided by VGNC
Primary source
VGNC:VGNC:38173
See related
Ensembl:ENSCAFG00000007324
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Also known as
ASH1
Orthologs

Genomic context

See ASCL1 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
2
Annotation release Status Assembly Chr Location
105 current CanFam3.1 (GCF_000002285.3) 15 NC_006597.3 (41694021..41696933)

Chromosome 15 - NC_006597.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111090067 Neighboring gene insulin like growth factor 1 Neighboring gene phenylalanine hydroxylase Neighboring gene uncharacterized LOC102152557 Neighboring gene uncharacterized LOC111098908

Genomic regions, transcripts, and products

Genomic Sequence:
NC_006597.3 Chromosome 15 Reference CanFam3.1 Primary Assembly

Pathways from BioSystems

  • Delta-Notch Signaling Pathway, organism-specific biosystem (from WikiPathways)
    Delta-Notch Signaling Pathway, organism-specific biosystemThere are 4 Notch receptors in humans (Notch 1-4) that bind to a family of 5 ligands (Jagged 1 and 2 and Delta-like 1-3). The Notch receptors are expressed on the cell surface as heterodimeric protei...

General gene information

Markers

Homology

General protein information

Preferred Names
achaete-scute homolog 1
Names
achaete-scute complex homolog 1

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CanFam3.1 Primary Assembly

Genomic

  1. NC_006597.3 Reference CanFam3.1 Primary Assembly

    Range
    41694021..41696933
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_539745.6XP_539745.3  achaete-scute homolog 1

    See identical proteins and their annotated locations for XP_539745.3

    UniProtKB/TrEMBL
    E2R359
    Related
    ENSCAFP00000010864.4, ENSCAFT00000011723.4
    Conserved Domains (1) summary
    smart00353
    Location:138180
    HLH; helix loop helix domain
  2. XM_005629297.3XP_005629354.1  achaete-scute homolog 1

    See identical proteins and their annotated locations for XP_005629354.1

    UniProtKB/TrEMBL
    E2R359
    Conserved Domains (1) summary
    smart00353
    Location:138180
    HLH; helix loop helix domain
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