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EXOSC4 exosome component 4 [ Canis lupus familiaris (dog) ]

Gene ID: 482086, updated on 25-Jul-2026
Official Symbol
EXOSC4provided by VGNC
Official Full Name
exosome component 4provided by VGNC
Primary source
VGNC:VGNC:40525
See related
Ensembl:ENSCAFG00845007577 RGD:12277854
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
all
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See EXOSC4 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
4
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 13 NC_051817.1 (38050575..38052551)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 13 NC_006595.4 (37538000..37539976)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 13 NC_049234.1 (38327465..38329442)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 13 NC_049273.1 (37722667..37724645)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 13 NC_049754.1 (37850873..37852853)

Chromosome 13 - NC_051817.1Genomic Context describing neighboring genes Neighboring gene sphingomyelin phosphodiesterase 5 Neighboring gene 5-oxoprolinase, ATP-hydrolysing Neighboring gene uncharacterized LOC119864653 Neighboring gene uncharacterized LOC119865005 Neighboring gene glycosylphosphatidylinositol anchor attachment 1 Neighboring gene cytochrome c1

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in U4 snRNA 3'-end processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nuclear mRNA surveillance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in poly(A)-dependent snoRNA 3'-end processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in rRNA catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytoplasmic exosome (RNase complex) IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of nuclear exosome (RNase complex) IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
exosome complex component RRP41

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051817.1 Reference ROS_Cfam_1.0

    Range
    38050575..38052551
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038685312.1 → XP_038541240.1  exosome complex component RRP41 isoform X1

    UniProtKB/TrEMBL
    A0A8C0KZ82, A0A8I3NHV7
    Related
    ENSCAFP00845010362.1, ENSCAFT00845013357.1
    Conserved Domains (1) summary
    cd11370
    Location:11 → 237
    RNase_PH_RRP41; RRP41 subunit of eukaryotic exosome

  2. XM_038685313.1 → XP_038541241.1  exosome complex component RRP41 isoform X2

    UniProtKB/TrEMBL
    A0A8I3RU08
    Conserved Domains (1) summary
    cd11370
    Location:21 → 201
    RNase_PH_RRP41; RRP41 subunit of eukaryotic exosome

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049273.1 Alternate UMICH_Zoey_3.1

    Range
    37722667..37724645
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038493486.1 → XP_038349414.1  

    Conserved Domains (1) summary
    cd11370
    Location:11 → 237
    RNase_PH_RRP41; RRP41 subunit of eukaryotic exosome

  2. XM_038493487.1 → XP_038349415.1  

    Conserved Domains (1) summary
    cd11370
    Location:21 → 201
    RNase_PH_RRP41; RRP41 subunit of eukaryotic exosome

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049754.1 Alternate UNSW_CanFamBas_1.0

    Range
    37850873..37852853
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038619709.1 → XP_038475637.1  

    Conserved Domains (1) summary
    cd11370
    Location:11 → 237
    RNase_PH_RRP41; RRP41 subunit of eukaryotic exosome

  2. XM_038619710.1 → XP_038475638.1  

    Conserved Domains (1) summary
    cd11370
    Location:21 → 201
    RNase_PH_RRP41; RRP41 subunit of eukaryotic exosome

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049234.1 Alternate UU_Cfam_GSD_1.0

    Range
    38327465..38329442
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038555788.1 → XP_038411716.1  exosome complex component RRP41 isoform X1

    UniProtKB/TrEMBL
    A0A8C0KZ82, A0A8I3NHV7
    Conserved Domains (1) summary
    cd11370
    Location:11 → 237
    RNase_PH_RRP41; RRP41 subunit of eukaryotic exosome

  2. XM_038555789.1 → XP_038411717.1  exosome complex component RRP41 isoform X2

    UniProtKB/TrEMBL
    A0A8I3RU08
    Conserved Domains (1) summary
    cd11370
    Location:21 → 201
    RNase_PH_RRP41; RRP41 subunit of eukaryotic exosome

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006595.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    37538000..37539976
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_539207.7 → XP_539207.1  exosome complex component RRP41 isoform X1

    UniProtKB/TrEMBL
    A0A8C0KZ82, A0A8I3NHV7
    Conserved Domains (1) summary
    cd11370
    Location:11 → 237
    RNase_PH_RRP41; RRP41 subunit of eukaryotic exosome

  2. XM_005628067.4 → XP_005628124.1  exosome complex component RRP41 isoform X2

    UniProtKB/TrEMBL
    A0A8I3RU08
    Conserved Domains (1) summary
    cd11370
    Location:21 → 201
    RNase_PH_RRP41; RRP41 subunit of eukaryotic exosome
Nucleotide Protein
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