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RSPO2 R-spondin 2 [ Canis lupus familiaris (dog) ]

Gene ID: 482004, updated on 5-Mar-2024

Summary

Official Symbol
RSPO2provided by VGNC
Official Full Name
R-spondin 2provided by VGNC
Primary source
VGNC:VGNC:45783
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
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Genomic context

See RSPO2 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
7
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 13 NC_051817.1 (8873544..9022401, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 13 NC_006595.4 (8550551..8728117, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 13 NC_049234.1 (8823008..8971462, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 13 NC_049273.1 (8627417..8772877, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 13 NC_049754.1 (8745404..8896677, complement)

Chromosome 13 - NC_051817.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111098519 Neighboring gene U2 spliceosomal RNA Neighboring gene uncharacterized LOC102154405 Neighboring gene eukaryotic translation initiation factor 3 subunit E

Genomic regions, transcripts, and products

General protein information

Preferred Names
R-spondin-2
Names
R-spondin 2 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051817.1 Reference ROS_Cfam_1.0

    Range
    8873544..9022401 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038684848.1XP_038540776.1  R-spondin-2 isoform X1

    UniProtKB/TrEMBL
    A0A8C0QHB7, A0A8C0QN03, A0A8I3NC08
    Conserved Domains (2) summary
    pfam15913
    Location:40141
    Furin-like_2; Furin-like repeat, cysteine-rich
    pfam19028
    Location:145198
    TSP1_spondin; Spondin-like TSP1 domain
  2. XM_038684849.1XP_038540777.1  R-spondin-2 isoform X1

    UniProtKB/TrEMBL
    A0A8C0QHB7, A0A8C0QN03, A0A8I3NC08
    Conserved Domains (2) summary
    pfam15913
    Location:40141
    Furin-like_2; Furin-like repeat, cysteine-rich
    pfam19028
    Location:145198
    TSP1_spondin; Spondin-like TSP1 domain
  3. XM_038684850.1XP_038540778.1  R-spondin-2 isoform X2

    Conserved Domains (2) summary
    pfam15913
    Location:174
    Furin-like_2; Furin-like repeat, cysteine-rich
    pfam19028
    Location:78131
    TSP1_spondin; Spondin-like TSP1 domain

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049273.1 Alternate UMICH_Zoey_3.1

    Range
    8627417..8772877 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038493073.1XP_038349001.1  R-spondin-2 isoform X1

    Conserved Domains (2) summary
    pfam15913
    Location:40141
    Furin-like_2; Furin-like repeat, cysteine-rich
    pfam19028
    Location:145198
    TSP1_spondin; Spondin-like TSP1 domain
  2. XM_038493074.1XP_038349002.1  R-spondin-2 isoform X1

    Conserved Domains (2) summary
    pfam15913
    Location:40141
    Furin-like_2; Furin-like repeat, cysteine-rich
    pfam19028
    Location:145198
    TSP1_spondin; Spondin-like TSP1 domain
  3. XM_038493075.1XP_038349003.1  R-spondin-2 isoform X2

    Conserved Domains (2) summary
    pfam15913
    Location:174
    Furin-like_2; Furin-like repeat, cysteine-rich
    pfam19028
    Location:78131
    TSP1_spondin; Spondin-like TSP1 domain

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049754.1 Alternate UNSW_CanFamBas_1.0

    Range
    8745404..8896677 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038619232.1XP_038475160.1  R-spondin-2 isoform X1

    Conserved Domains (2) summary
    pfam15913
    Location:40141
    Furin-like_2; Furin-like repeat, cysteine-rich
    pfam19028
    Location:145198
    TSP1_spondin; Spondin-like TSP1 domain
  2. XM_038619233.1XP_038475161.1  R-spondin-2 isoform X1

    Conserved Domains (2) summary
    pfam15913
    Location:40141
    Furin-like_2; Furin-like repeat, cysteine-rich
    pfam19028
    Location:145198
    TSP1_spondin; Spondin-like TSP1 domain
  3. XM_038619234.1XP_038475162.1  R-spondin-2 isoform X2

    Conserved Domains (2) summary
    pfam15913
    Location:174
    Furin-like_2; Furin-like repeat, cysteine-rich
    pfam19028
    Location:78131
    TSP1_spondin; Spondin-like TSP1 domain

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049234.1 Alternate UU_Cfam_GSD_1.0

    Range
    8823008..8971462 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038555332.1XP_038411260.1  R-spondin-2 isoform X1

    UniProtKB/TrEMBL
    A0A8C0QHB7, A0A8C0QN03, A0A8I3NC08
    Conserved Domains (2) summary
    pfam15913
    Location:40141
    Furin-like_2; Furin-like repeat, cysteine-rich
    pfam19028
    Location:145198
    TSP1_spondin; Spondin-like TSP1 domain
  2. XM_038555333.1XP_038411261.1  R-spondin-2 isoform X1

    UniProtKB/TrEMBL
    A0A8C0QHB7, A0A8C0QN03, A0A8I3NC08
    Conserved Domains (2) summary
    pfam15913
    Location:40141
    Furin-like_2; Furin-like repeat, cysteine-rich
    pfam19028
    Location:145198
    TSP1_spondin; Spondin-like TSP1 domain
  3. XM_038555334.1XP_038411262.1  R-spondin-2 isoform X2

    Conserved Domains (2) summary
    pfam15913
    Location:174
    Furin-like_2; Furin-like repeat, cysteine-rich
    pfam19028
    Location:78131
    TSP1_spondin; Spondin-like TSP1 domain

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006595.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    8550551..8728117 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005627871.4XP_005627928.1  R-spondin-2 isoform X1

    See identical proteins and their annotated locations for XP_005627928.1

    UniProtKB/TrEMBL
    A0A8C0QHB7, A0A8C0QN03, A0A8I3NC08
    Conserved Domains (2) summary
    pfam15913
    Location:40141
    Furin-like_2; Furin-like repeat, cysteine-rich
    pfam19028
    Location:145198
    TSP1_spondin; Spondin-like TSP1 domain
  2. XM_539125.6XP_539125.2  R-spondin-2 isoform X1

    See identical proteins and their annotated locations for XP_539125.2

    UniProtKB/TrEMBL
    A0A8C0QHB7, A0A8C0QN03, A0A8I3NC08
    Conserved Domains (2) summary
    pfam15913
    Location:40141
    Furin-like_2; Furin-like repeat, cysteine-rich
    pfam19028
    Location:145198
    TSP1_spondin; Spondin-like TSP1 domain
  3. XM_022426651.2XP_022282359.2  R-spondin-2 isoform X2

    Conserved Domains (2) summary
    pfam15913
    Location:174
    Furin-like_2; Furin-like repeat, cysteine-rich
    pfam19028
    Location:78131
    TSP1_spondin; Spondin-like TSP1 domain