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RAB23 RAB23, member RAS oncogene family [ Canis lupus familiaris (dog) ]

Gene ID: 481854, updated on 17-Aug-2024

Summary

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Official Symbol
RAB23provided by VGNC
Official Full Name
RAB23, member RAS oncogene familyprovided by VGNC
Primary source
VGNC:VGNC:45263
See related
Ensembl:ENSCAFG00845006719
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 12
Exon count:
9
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 12 NC_051816.1 (24928158..24977111)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 12 NC_006594.4 (24318464..24367881)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 12 NC_049233.1 (24658037..24707772)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 12 NC_049272.1 (24425198..24474987)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 12 NC_049753.1 (24526566..24576395)

Chromosome 12 - NC_051816.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119874189 Neighboring gene BAG cochaperone 2 Neighboring gene eukaryotic translation initiation factor 4B-like Neighboring gene DNA primase subunit 2 Neighboring gene uncharacterized LOC111098164

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Differential role of Rab proteins in ciliary trafficking: Rab23 regulates smoothened levels. Boehlke C, et al. J Cell Sci, 2010 May 1. PMID 20375059

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ras-related protein Rab-23
Names
ras-related protein Rab-23-like
XP_005627565.1
XP_038348061.1
XP_038348062.1
XP_038410344.1
XP_038410345.1
XP_038474210.1
XP_038474211.1
XP_038530800.1
XP_038539778.1
XP_038539779.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051816.1 Reference ROS_Cfam_1.0

    Range
    24928158..24977111
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038683851.1 → XP_038539779.1  ras-related protein Rab-23

    UniProtKB/TrEMBL
    A0A8C0KSU7, A0A8C0MH01, A0A8I3NF40
    Related
    ENSCAFP00845009296.1, ENSCAFT00845011916.1
    Conserved Domains (1) summary
    cd04106
    Location:10 → 169
    Rab23_like; Rab GTPase family 23 (Rab23)-like

  2. XM_038683850.1 → XP_038539778.1  ras-related protein Rab-23

    UniProtKB/TrEMBL
    A0A8C0KSU7, A0A8C0MH01, A0A8I3NF40
    Conserved Domains (1) summary
    cd04106
    Location:10 → 169
    Rab23_like; Rab GTPase family 23 (Rab23)-like

RNA

  1. XR_005435654.1 RNA Sequence

  2. XR_005435653.1 RNA Sequence

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049272.1 Alternate UMICH_Zoey_3.1

    Range
    24425198..24474987
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038492134.1 → XP_038348062.1  ras-related protein Rab-23

    Conserved Domains (1) summary
    cd04106
    Location:10 → 169
    Rab23_like; Rab GTPase family 23 (Rab23)-like

  2. XM_038492133.1 → XP_038348061.1  ras-related protein Rab-23

    Conserved Domains (1) summary
    cd04106
    Location:10 → 169
    Rab23_like; Rab GTPase family 23 (Rab23)-like

RNA

  1. XR_005334133.1 RNA Sequence

  2. XR_005334132.1 RNA Sequence

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049753.1 Alternate UNSW_CanFamBas_1.0

    Range
    24526566..24576395
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038618283.1 → XP_038474211.1  ras-related protein Rab-23

    Conserved Domains (1) summary
    cd04106
    Location:10 → 169
    Rab23_like; Rab GTPase family 23 (Rab23)-like

  2. XM_038618282.1 → XP_038474210.1  ras-related protein Rab-23

    Conserved Domains (1) summary
    cd04106
    Location:10 → 169
    Rab23_like; Rab GTPase family 23 (Rab23)-like

RNA

  1. XR_005402231.1 RNA Sequence

  2. XR_005402230.1 RNA Sequence

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049233.1 Alternate UU_Cfam_GSD_1.0

    Range
    24658037..24707772
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038554417.1 → XP_038410345.1  ras-related protein Rab-23

    UniProtKB/TrEMBL
    A0A8C0KSU7, A0A8C0MH01, A0A8I3NF40
    Conserved Domains (1) summary
    cd04106
    Location:10 → 169
    Rab23_like; Rab GTPase family 23 (Rab23)-like

  2. XM_038554416.1 → XP_038410344.1  ras-related protein Rab-23

    UniProtKB/TrEMBL
    A0A8C0KSU7, A0A8C0MH01, A0A8I3NF40
    Conserved Domains (1) summary
    cd04106
    Location:10 → 169
    Rab23_like; Rab GTPase family 23 (Rab23)-like

RNA

  1. XR_005367880.1 RNA Sequence

  2. XR_005367879.1 RNA Sequence

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006594.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    24318464..24367881
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005627508.3 → XP_005627565.1  ras-related protein Rab-23

    UniProtKB/TrEMBL
    A0A8C0KSU7, A0A8C0MH01, A0A8I3NF40
    Conserved Domains (1) summary
    cd04106
    Location:10 → 169
    Rab23_like; Rab GTPase family 23 (Rab23)-like

  2. XM_038674872.1 → XP_038530800.1  ras-related protein Rab-23

    UniProtKB/TrEMBL
    A0A8C0KSU7, A0A8C0MH01, A0A8I3NF40
    Conserved Domains (1) summary
    cd04106
    Location:10 → 169
    Rab23_like; Rab GTPase family 23 (Rab23)-like

RNA

  1. XR_005431577.1 RNA Sequence

  2. XR_005431572.1 RNA Sequence

Nucleotide Protein
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